Pairwise Alignments

Query, 542 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 516 a.a., putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  324 bits (831), Expect = 4e-93
 Identities = 173/496 (34%), Positives = 277/496 (55%), Gaps = 16/496 (3%)

Query: 2   LVMMLAIIVRFYCISLPYFWTDEAFSALVGVQSPGRIWFHLGHDVHPPLYFLVLHAWMAI 61
           L+++ ++++R   ++  Y W DEA S L+   S   + FH   DVHPPLY+L+LH WM +
Sbjct: 26  LIVIFSVLIRLLFLTDRYLWCDEASSVLISRHSVDNLLFHAAFDVHPPLYYLLLHDWMIL 85

Query: 62  FGEGVFAIRALSALAGVATVALGMWLMRLISTPRVALLAGLFLALLPISVRYSQEARMYT 121
           +G+ + A+R+LS L G+ TV L + L R ++  R ALLAG F AL+P++V YSQE RMY 
Sbjct: 86  WGDSIAAVRSLSLLFGILTVVLVIALTRWLANERTALLAGWFAALMPMAVHYSQETRMYA 145

Query: 122 LEGVWLLGATIALVYWLKS-ARNRYLMSYLVLMTAALYTHYLAVLCLLSHWLYLVVLRLQ 180
           L G+  L A +AL+ W+K+   NRYL++Y +LMT + YTHY  +  L++HW+ + +L  Q
Sbjct: 146 LMGMLTLAAALALMMWIKTPTHNRYLVAYALLMTFSFYTHYFTLFTLIAHWIAVTILSCQ 205

Query: 181 RDKTLHYLSRPTWWGTNVAIVVLYIPWLISLGNELFLNTEKLETGGDIFWIPELTIYTLP 240
             KT  YL  P WW  N+AI V Y+PWL  L N L  +  +L  G DI WIP +T   LP
Sbjct: 206 SHKTACYLKLPGWWFANLAIAVAYLPWLPVLFN-LLTHLAQLRAGNDIGWIPPVTWRDLP 264

Query: 241 SAVWKFLTVKSGLEFASPIYVLLPALVMASVVWVGFKERSRLKLELLLVIYVLLPVLIVF 300
           +  W F T  +G  F S I  L     + +V  +        + +L+L   +++PV++VF
Sbjct: 265 AMYWHFFTGNNGQGFPSFILWLAVGGFIGTVGRISLCNGEYERYQLILFCNLVIPVMLVF 324

Query: 301 VVSFGFPIFVERYMAFAALGLPMIVALAISRIAHRTRALAWVSALLMVGVQLMGLNTIYQ 360
           ++S+  P+F++RY  F++L +P ++A+ ++R A +     W     ++   L G  + + 
Sbjct: 325 IISWWMPLFIDRYFFFSSLSIPPLLAVLLTR-AKKAVCGFW----FILFTLLFGYGSYHN 379

Query: 361 QQDDLDDPRNASQYPLDDIVSRINENAIAGDNIIVDGAYWYYSVAYYNRSDIQPRLYQAP 420
             + +D+           +V+ IN      D ++V   + Y S  YYN+ D +  LY  P
Sbjct: 380 NPEHIDE--------FKPLVNYINTRHQPNDAVVVSKMFDYLSYVYYNKRDYRTFLYTPP 431

Query: 421 WDSSTAHRPNGYGASTLIYQDRDKVFLDNLVSVSPEIKRVWWVTSTRLADEENHFPGNWQ 480
               T+ RPN YG  +L Y   D+ ++D L ++S    RVW V+    + ++   P  WQ
Sbjct: 432 NAHGTSGRPNAYGFGSLFYAQADQTYIDTLTTLSKSYHRVWLVSGGNFS-QDYPLPSEWQ 490

Query: 481 CVFAQGLGDMELRLYV 496
            +     G  +++L+V
Sbjct: 491 NIAKFRSGRFQVQLFV 506