Pairwise Alignments

Query, 467 a.a., poly(A) polymerase from Pseudomonas fluorescens FW300-N2E3

Subject, 465 a.a., poly(A) polymerase I (VIMSS) from Escherichia coli BW25113

 Score =  377 bits (968), Expect = e-109
 Identities = 204/438 (46%), Positives = 278/438 (63%), Gaps = 14/438 (3%)

Query: 25  VLNSSQHSLQRAQFSRYAVNIVERLQSAGYQAYLVGGCVRDMLLNITPKDFDVATSATPE 84
           V+   QH++ R   S  A+ ++ RL  AGY+A+LVGG VRD+LL   PKDFDV T+ATPE
Sbjct: 31  VIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPE 90

Query: 85  QVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRANHPQNDEEEDSNQSSRNESGRILRD 144
           QVR  FRN R++GRRF+L H+ FG EIIEVATFR +H  N    D   S R ++G +LRD
Sbjct: 91  QVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGN--VSDRTTSQRGQNGMLLRD 148

Query: 145 NVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVHDIRNHLIRLIGDPTQRYQEDPVR 204
           N++G++EEDAQRRDFTIN+LYY      + DY  G+ D+++ +IRLIG+P  RY+EDPVR
Sbjct: 149 NIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVR 208

Query: 205 MLRAVRFAAKLDFGIEKHSATPIRNLAPMLREIPSARLFEEVLKLFLSGHAADTFEMLVD 264
           MLRAVRFAAKL   I   +A PI  LA +L +IP ARLFEE LKL  +G+  +T+++L +
Sbjct: 209 MLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCE 268

Query: 265 LQLFDPLFPASAEAL-EHNPTYTHTLISEALINTDLRIKQNKPVTPAFLFAALLW-PALP 322
             LF PLFP       E+  +    +I + L NTD RI  +  V PAFLFAA+ W P L 
Sbjct: 269 YHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLE 328

Query: 323 ARVLRLQDRGMPPIPAMQEAAHELISEQCQRIAIPKRFTMPIREIWDMQERLPRRSGKRA 382
                 Q+ G+    A   A ++++ E C+ +AIPKR T   R+IW +Q R+ RR GKRA
Sbjct: 329 TAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRA 388

Query: 383 DLLLDNPRFRAGYDFLLLRESA--GEQTNGLGEWWTDYQDANESERRDMIRDLSGKDDGA 440
             LL++P+FRA YD L LR       +   L +WW ++Q +   +++ M+ +L  +    
Sbjct: 389 WKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEP--- 445

Query: 441 SGAPRKRRRSGGAKRKRA 458
             +PR+R R     RKRA
Sbjct: 446 --SPRRRTR---RPRKRA 458