Pairwise Alignments

Query, 754 a.a., DNA topoisomerase IV from Pseudomonas fluorescens FW300-N2E3

Subject, 782 a.a., Topoisomerase IV subunit A (EC 5.99.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  546 bits (1406), Expect = e-159
 Identities = 326/781 (41%), Positives = 466/781 (59%), Gaps = 48/781 (6%)

Query: 2   SDSLDLSLDGVERR-SLADFTENAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELG 60
           S + DL L   E   +LA++ + AYL Y++ V+  RALP + DG KPVQRRI+Y+M  +G
Sbjct: 3   STTEDLPLSSPEPEDNLANYAQRAYLEYALSVVKGRALPDVCDGQKPVQRRILYSMDRMG 62

Query: 61  LDADSKHK-------KSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNW 113
           L     ++       KSAR VGDVLG+FHPHGD A Y+A+V MAQ F+ RY L+DGQGN+
Sbjct: 63  LGFSGPNRNTAARPVKSARVVGDVLGRFHPHGDQAAYDALVRMAQDFAQRYPLIDGQGNF 122

Query: 114 GAPDDPKSFAAMRYTEARLSRYSEVLLSELGQGTADWGPNFDGTLDEPLVLPARLPNILL 173
           G+ D   + AAMRYTEARLSR + +LL E+ +GT D+ PN+DG+  EP  LPARLP  LL
Sbjct: 123 GSRDGDGA-AAMRYTEARLSRITTLLLDEIDEGTVDFVPNYDGSTVEPKQLPARLPFNLL 181

Query: 174 NGTTGIAVGMATDVPPHNLREVATACVRLLDEPKATVEQLCEHIQGPDYPTEAEIITPRA 233
           NG +GIAVG+AT++P HNLREVA ACV L+  PK   ++L   + GPDYP   +II+P +
Sbjct: 182 NGASGIAVGLATEIPSHNLREVADACVALVKNPKLADDELLTLLPGPDYPGGGQIISPAS 241

Query: 234 DLLKIYETGRGSVRMRAVYHIED-----GDIVVTALPHQVSGAKVLEQIAAMM------- 281
           D+   Y TGRGS+++RA + IED       +VVT LP  VS  +VLE+I  +        
Sbjct: 242 DIADAYRTGRGSLKVRARWKIEDLARGQWQLVVTELPPGVSTQRVLEEIEELTNPKVKAG 301

Query: 282 ---------QAKPSKAPQVADLRDESDHENPCRIVIIPVNSRVDHEALMQHLFASTELES 332
                    Q K S    +  +RDES  + P R++  P +SR++ + L+  L A T LE+
Sbjct: 302 KKALTQEQTQLKASILMVLDGVRDESSKDAPVRLLFEPKSSRIEQQELITALLAHTSLET 361

Query: 333 SYRVNINIIGLDGKPQLKNLRALLVEWLEFRVQTVRRRLQFRLDKVERRLHLLDGLLIAY 392
           S  +N+ ++GLDG+P  K+LR +L EW+EFR  T+ RR Q RL KV  R+H+L+G  +  
Sbjct: 362 SAPINLTMVGLDGRPTQKSLRQMLTEWIEFRQGTITRRSQHRLTKVLDRIHILEGRQLVL 421

Query: 393 LNLDEVIHIIRTEEHPKAKLIERFALSEIQADYILDTRLRQLAKLEEMKLRGEQDELLKE 452
           LN+DEVI IIR  + PKA LIERF LS+ QA+ IL+ RLRQLA+LE +K+  E  EL +E
Sbjct: 422 LNIDEVIRIIRHSDEPKAALIERFKLSDRQAEDILEIRLRQLARLEAIKIEQELKELREE 481

Query: 453 QAKLQALLGSETKLKKLVRSELIKDAETYGDDRRSPIVERAEAKALTEHDLLPNEKVTVV 512
           Q KL+ +LG+   LK+L+  E+  DA+T+ D+RR+ I  +AE KA+ E  ++ +E VTVV
Sbjct: 482 QGKLEDILGNPGSLKRLMVKEIEADAKTFADERRTLI--QAEKKAVAEIKVV-DEPVTVV 538

Query: 513 LSEKGWVRSAKGHDIDATGLSYKAGDGFKTAAAGRSNQFAVFIDSTGRSYSVPAHTLPSA 572
           +S KGWVR+  GH  +A   ++KAGDG       R+    +   S GR YSVP  +LP A
Sbjct: 539 ISSKGWVRARTGHGHEAGSFAFKAGDGLYGTFECRTVDTLITFGSNGRVYSVPVASLPGA 598

Query: 573 RGQGEPLTGRLTPPPGATFECVLMPEDDGLYVIASDAGYGFVVKGEDLQAKNKAGKALLS 632
           RG G+P+T  +    G           +   +++S  GYGF+   E++ ++ + GK  L+
Sbjct: 599 RGDGQPITTLIELESGTQPLHYFAGPANAALLLSSSGGYGFLATVENMVSRQRGGKTFLN 658

Query: 633 LPNNAKVILPRPVADRE-------QNWLASVTTEGRLLIFKISDLPQLGK-GKGNKIIGI 684
           L        P   A             +   +T GR+L F+I +L  + K G+G  +I +
Sbjct: 659 LGEGETPCAPSHAAFTSGGVPLVPATHVCCASTGGRILTFEIGELKLMEKGGRGLMLIDL 718

Query: 685 SG-ERVASREEYVTDIAVLPEGATLVLQAGK-RTLSLKADDLEHYKGERGRRGNKLPRGF 742
              + +A    Y   + +  EG   + + GK R  +L+   L + +  R R+G     GF
Sbjct: 719 EAKDTLAGAAAYTRSVKI--EG---IGRGGKEREETLEIRSLNNARAARARKGKAADLGF 773

Query: 743 Q 743
           +
Sbjct: 774 K 774