Pairwise Alignments

Query, 754 a.a., DNA topoisomerase IV from Pseudomonas fluorescens FW300-N2E3

Subject, 752 a.a., DNA topoisomerase IV, subunit A from Escherichia coli BL21

 Score =  997 bits (2577), Expect = 0.0
 Identities = 498/743 (67%), Positives = 603/743 (81%), Gaps = 4/743 (0%)

Query: 10  DGVERRSLADFTENAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELGLDADSKHKK 69
           D  ER +L +FTENAYLNYSMYVIMDRALP IGDGLKPVQRRI+YAMSELGL+A +K KK
Sbjct: 3   DMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKK 62

Query: 70  SARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTE 129
           SARTVGDVLGK+HPHGDSACYEAMVLMAQPFSYRY LVDGQGNWGAPDDPKSFAAMRYTE
Sbjct: 63  SARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTE 122

Query: 130 ARLSRYSEVLLSELGQGTADWGPNFDGTLDEPLVLPARLPNILLNGTTGIAVGMATDVPP 189
           +RLS+YSE+LLSELGQGTADW PNFDGTL EP +LPARLPNILLNGTTGIAVGMATD+PP
Sbjct: 123 SRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPP 182

Query: 190 HNLREVATACVRLLDEPKATVEQLCEHIQGPDYPTEAEIITPRADLLKIYETGRGSVRMR 249
           HNLREVA A + L+D+PK T++QL + +QGPDYPTEAEIIT RA++ KIYE GRGSVRMR
Sbjct: 183 HNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMR 242

Query: 250 AVYHIEDGDIVVTALPHQVSGAKVLEQIAAMMQAKPSKAPQVADLRDESDHENPCRIVII 309
           AV+  EDG +V++ALPHQVSGA+VLEQIAA M+ K  K P V DLRDESDHENP R+VI+
Sbjct: 243 AVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNK--KLPMVDDLRDESDHENPTRLVIV 300

Query: 310 PVNSRVDHEALMQHLFASTELESSYRVNINIIGLDGKPQLKNLRALLVEWLEFRVQTVRR 369
           P ++RVD + +M HLFA+T+LE SYR+N+N+IGLDG+P +KNL  +L EWL FR  TVRR
Sbjct: 301 PRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRR 360

Query: 370 RLQFRLDKVERRLHLLDGLLIAYLNLDEVIHIIRTEEHPKAKLIERFALSEIQADYILDT 429
           RL +RL+KV +RLH+L+GLL+A+LN+DEVI IIR E+ PK  L+ RF L+E QA+ IL+ 
Sbjct: 361 RLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILEL 420

Query: 430 RLRQLAKLEEMKLRGEQDELLKEQAKLQALLGSETKLKKLVRSELIKDAETYGDDRRSPI 489
           +LR LAKLEEMK+RGEQ EL KE+ +LQ +L SE K+  L++ EL  DA  YGDDRRSP+
Sbjct: 421 KLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQADAHAYGDDRRSPL 480

Query: 490 VERAEAKALTEHDLLPNEKVTVVLSEKGWVRSAKGHDIDATGLSYKAGDGFKTAAAGRSN 549
            ER EAKA++EHD+LP+E VT+VLS+ GWVRSAKGHDIDA GL+YKAGD FK A  G+SN
Sbjct: 481 QEREEAKAMSEHDMLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSN 540

Query: 550 QFAVFIDSTGRSYSVPAHTLPSARGQGEPLTGRLTPPPGATFECVLMPEDDGLYVIASDA 609
           Q  VF+DSTGRSY++   TLPSARGQGEPLTG+LT PPGAT + +LM  DD   ++ASDA
Sbjct: 541 QPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDA 600

Query: 610 GYGFVVKGEDLQAKNKAGKALLSLPNNAKVILPRPVADREQNWLASVTTEGRLLIFKISD 669
           GYGFV    DL A+N+AGKAL++LP NA V +P  V +   + L ++T  GR+L+F +SD
Sbjct: 601 GYGFVCTFNDLVARNRAGKALITLPENAHV-MPPVVIEDASDMLLAITQAGRMLMFPVSD 659

Query: 670 LPQLGKGKGNKIIGISGERVASREEYVTDIAVLPEGATLVLQAGKRTLSLKADDLEHYKG 729
           LPQL KGKGNKII I     A  E+ +  + VLP  +TL +  GKR + L+ ++L+   G
Sbjct: 660 LPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTG 719

Query: 730 ERGRRGNKLPRGFQRVDALLVEA 752
           ERGRRG  L RG QR+D + +++
Sbjct: 720 ERGRRGT-LMRGLQRIDRVEIDS 741