Pairwise Alignments

Query, 634 a.a., DNA topoisomerase IV from Pseudomonas fluorescens FW300-N2E3

Subject, 630 a.a., DNA topoisomerase IV, subunit B from Escherichia coli BL21

 Score =  942 bits (2435), Expect = 0.0
 Identities = 460/627 (73%), Positives = 541/627 (86%), Gaps = 4/627 (0%)

Query: 8   SYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHATSVQVILHADH 67
           +YNADAIEVL+GL+PVR+RPGMYTDT+RPNHL QEVIDNSVDEALAGHA  V VILHAD 
Sbjct: 4   TYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILHADQ 63

Query: 68  SLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNALS 127
           SLEV DDGRGMPVDIHPEEGV  VELIL +LHAGGKFSNKNYQFSGGLHGVGISVVNALS
Sbjct: 64  SLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALS 123

Query: 128 TQVRVRVKRDGNEYQMTFADGYKATDLEVVGTVGKRNTGTSVYFAPDPKYFDSPKFSISR 187
            +V V V+RDG  Y + F +G K  DL+VVGT GKRNTGTSV+F PD  +FDSP+FS+SR
Sbjct: 124 KRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSR 183

Query: 188 LKHVLKAKAVLCPGLLVSFEDKATGEKVEWHYEDGLRSYLVDAVSEFERLPDEPFCGSLA 247
           L HVLKAKAVLCPG+ ++F+D+    +  W Y+DGL  YL +AV+    LP++PF G+ A
Sbjct: 184 LTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPFIGNFA 243

Query: 248 GNKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRSLLPR 307
           G+ EAVDWALLWLPEGG+ + ESYVNLIPT QGGTHVNGLRQGLLDAMREFCE+R++LPR
Sbjct: 244 GDTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNILPR 303

Query: 308 GVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNANPE 367
           GVKL+ ED+W+R A+VLS+KMQ+PQF+GQTKERLSSR+ AAFVSGVVKDAF LWLN N +
Sbjct: 304 GVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQNVQ 363

Query: 368 LGLQLAELAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFLVEGDSAG 427
               LAE+AI++A RR++A+KKV RK++T GPALPGKLADC  QD  R+ELFLVEGDSAG
Sbjct: 364 AAELLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEGDSAG 423

Query: 428 GSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAADMSQLRYG 487
           GSAKQARD+E+QAI+PL+GKILNTWEV   EVLASQEVH+I+VAIG+DP + D+SQLRYG
Sbjct: 424 GSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQLRYG 483

Query: 488 KICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIYYALDEAE 547
           KICILADADSDGLHIATLLCALFV+HFR LV  GHVYVA+PPLYRIDLGKE+YYAL E E
Sbjct: 484 KICILADADSDGLHIATLLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEE 543

Query: 548 RDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLD--DFEATSE 605
           ++G+L++L  ++K+GKP V RFKGLGEMNP QLRETT+DPNTRRLVQLT+D  D + T  
Sbjct: 544 KEGVLEQL--KRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDA 601

Query: 606 MMDMLLAKKRAGDRKSWLESKGNLAEV 632
           MMDMLLAKKR+ DR++WL+ KG++AE+
Sbjct: 602 MMDMLLAKKRSEDRRNWLQEKGDMAEI 628