Pairwise Alignments

Query, 424 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Pseudomonas fluorescens FW300-N2E3

Subject, 676 a.a., Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  289 bits (739), Expect = 2e-82
 Identities = 166/398 (41%), Positives = 236/398 (59%), Gaps = 12/398 (3%)

Query: 21  LWLRSRKAPAYAKRIGERFSIGLPV--MKPGGIWVHAVSVGESIAAAPMIRGLLERYPQL 78
           LW R R+ P Y + +  R    +PV   + G IWVHA SVGE  A  P++  LLE +P  
Sbjct: 33  LWWRGRREPGYRQNLRHRLGF-IPVDPEQLGCIWVHAASVGEVQAMQPLLHALLEEWPAH 91

Query: 79  PITVTCMTPTGSERIHAMFANEPRIQHCYLPYDLPCAAARFLDRVQPKLAVIMETELWPN 138
            + V+  TPTG+  + A + ++  I+H Y P D P A ARFL+R+QP+L +++E ELWP 
Sbjct: 92  AVVVSTQTPTGARALQAHWGDQ--IRHVYAPIDTPGAVARFLNRLQPRLLILVERELWPE 149

Query: 139 HIHQCAKRGIPVALANARLSERSAKGYGRFGKLTQPMLAEMSLFAVQTEAEAERFRQLGA 198
            + QC    IPVAL NARLSE SA+ Y R+  L +P+  ++++ A  T A A+R R+LG 
Sbjct: 150 WLLQCRAHAIPVALVNARLSEGSARTYRRWPGLMRPVWPQLTVAAADT-ASAQRLRELGV 208

Query: 199 RAETVEVTGSIKFDLRIDPQLLQRAAELRQQWQAVERPVWIAASTHEGEDEVVLAAHRQL 258
               +  TG++KFD+ +    +    EL+      ER + +A STHEG++   LA  R+L
Sbjct: 209 PPARLHETGNLKFDVAVPAARVALPPELQ------ERTLVVAGSTHEGDEVAWLAIWREL 262

Query: 259 LASHPDALLILVPRHPERFNPVFELCQQQGFNTIRRSTGEMVSASTSVLLGDTMGELLFL 318
              +P  LL+LVPRHP+RF+ V +  Q  G   +RRS+G++V+  T VLL D MGEL+  
Sbjct: 263 APVNPSWLLVLVPRHPQRFDEVADHLQHSGLAFVRRSSGQVVAPGTQVLLVDAMGELMHW 322

Query: 319 YALADSAFVGGSLVPNGGHNLLEPAALAKPVLSGPHLFNFLEIATLMRSAKALQEVDDAQ 378
           Y  A   FVGG+L P GGHN LEP ++ +PVL GPH+ N   +   +  + A + V  A+
Sbjct: 323 YQHASLCFVGGTLAPVGGHNPLEPMSVGQPVLFGPHVHNAAPLFEEIARSGAGECVRSAR 382

Query: 379 GLALAVQRLFELPRDAQRMAEAGLNVMRANQGALQRLL 416
            LA AVQR    P   QR A+A   ++  N+GA  R L
Sbjct: 383 ELAAAVQRWLVQPETWQRRADAARELIARNRGASARTL 420