Pairwise Alignments

Query, 424 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Pseudomonas fluorescens FW300-N2E3

Subject, 425 a.a., 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) from Escherichia coli BL21

 Score =  434 bits (1117), Expect = e-126
 Identities = 232/416 (55%), Positives = 279/416 (67%), Gaps = 3/416 (0%)

Query: 1   MNRTLYTALFYLGLPLVAIRLWLRSRKAPAYAKRIGERFSIGLPVMKPGGIWVHAVSVGE 60
           M   LYTAL YL  PL+ IRLW+R RKAPAY KR GER+      +KPGGI +H+VSVGE
Sbjct: 1   MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGE 60

Query: 61  SIAAAPMIRGLLERYPQLPITVTCMTPTGSERIHAMFANEPRIQHCYLPYDLPCAAARFL 120
           ++AA P++R L  RYP LPITVT MTPTGSER+ + F  +  +QH YLPYDLP A  RFL
Sbjct: 61  TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKD--VQHVYLPYDLPDALNRFL 118

Query: 121 DRVQPKLAVIMETELWPNHIHQCAKRGIPVALANARLSERSAKGYGRFGKLTQPMLAEMS 180
           ++V PKL +IMETELWPN I    KR IP+ +ANARLS RSA GY + GK  + +L  ++
Sbjct: 119 NKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRIT 178

Query: 181 LFAVQTEAEAERFRQLGARAETVEVTGSIKFDLRIDPQLLQRAAELRQQWQAVERPVWIA 240
           L A Q E +  RF  LGA+   V VTGS+KFD+ + PQL  +A  LR+QW A  RPVWIA
Sbjct: 179 LIAAQNEEDGARFVSLGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQW-APHRPVWIA 237

Query: 241 ASTHEGEDEVVLAAHRQLLASHPDALLILVPRHPERFNPVFELCQQQGFNTIRRSTGEMV 300
            STHEGE+ VV+AAH+ LL   P+ LLILVPRHPERF     L +Q G + I RS+GE+ 
Sbjct: 238 TSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVP 297

Query: 301 SASTSVLLGDTMGELLFLYALADSAFVGGSLVPNGGHNLLEPAALAKPVLSGPHLFNFLE 360
           S ST V++GDTMGEL+ LY +AD AFVGGSLV  GGHN LE AA A PVL GPH FNF +
Sbjct: 298 STSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKD 357

Query: 361 IATLMRSAKALQEVDDAQGLALAVQRLFELPRDAQRMAEAGLNVMRANQGALQRLL 416
           I   +  A  L  V DA  LA  V  L              + V+  NQGALQRLL
Sbjct: 358 ICARLEQASGLITVTDATTLAKEVSSLLTDADYRSFYGRHAVEVLYQNQGALQRLL 413