Pairwise Alignments

Query, 779 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 770 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 1287 bits (3330), Expect = 0.0
 Identities = 651/769 (84%), Positives = 708/769 (92%)

Query: 3   LPSERRLPRLFLTLLLAVLALAGWQWHDGAPLSANLMDLVPGTAPDALELKAEQRMQEPL 62
           +PSER LPRLFL LL+AVLALAGWQW  GAPLSANLM+LVPG  PDALE +AEQRMQEPL
Sbjct: 1   MPSERLLPRLFLILLVAVLALAGWQWRHGAPLSANLMELVPGNTPDALEQQAEQRMQEPL 60

Query: 63  NREMLVLVGHTNREQAIAMTQKLGEQWLASGLFEKVQWNLQADLPALRAQLLQGRLAMLS 122
           NRE+LVLVGH +R+QA+A+ Q+LGE W ASGLFEKVQWNLQADLPALR QLL+GRLAMLS
Sbjct: 61  NRELLVLVGHADRQQAVAVAQQLGEHWQASGLFEKVQWNLQADLPALREQLLRGRLAMLS 120

Query: 123 AADRQQLIEQPQAFIQQRVQALFDPFTGFSLVPSQDDWLGLTGRIQNSQPQHGSVQLDIG 182
           A DR+QLIE P AFIQ+RVQALFDPFTGFSLVPSQDDWLGLTGRIQNSQPQ GSVQLDIG
Sbjct: 121 AKDREQLIEHPDAFIQERVQALFDPFTGFSLVPSQDDWLGLTGRIQNSQPQQGSVQLDIG 180

Query: 183 SGTLVADADGKSWVMLRARTSGNAFDMQLPLKVAELLKHSREEAAQADVQLLAASGLLYA 242
           SG L+ADADGKSWV+LRART+GNAFDM+LPL+VA+LL+ SR +A+    QLLAASGLLYA
Sbjct: 181 SGALIADADGKSWVLLRARTTGNAFDMKLPLQVADLLQASRTQASAHGAQLLAASGLLYA 240

Query: 243 ANGQQQATREITWVGGGATVGILLLLLLAFRRFRVLLAFIPVLVGMLFGAVACVALFGHM 302
           ANGQQQATREITWVGGGATVGILLLLLLAFRR+RVLLAF+PVLVGMLFGAVACVALFGHM
Sbjct: 241 ANGQQQATREITWVGGGATVGILLLLLLAFRRWRVLLAFVPVLVGMLFGAVACVALFGHM 300

Query: 303 HVMTLVLGSSLIGVAVDYPLHYLSKSWSLKPWHSWPALRLTLPGLTLSLATSCIGYLALA 362
           HVMTLVLGSSLIGVAVDYPLHYLSKSWS++PW SWPALRLTLPGL+LSLATSCIGYLALA
Sbjct: 301 HVMTLVLGSSLIGVAVDYPLHYLSKSWSMRPWRSWPALRLTLPGLSLSLATSCIGYLALA 360

Query: 363 WTPFPALTQIAVFSAAGLLGAYLSAVCLLPALLKGTDLRPAQWPLRVAEFLVNVRAALLK 422
           WTPFPALTQIAVFSAAGL+GAYLSAVCLLPALLKG +LRPAQWPLR+AE L  VR +LLK
Sbjct: 361 WTPFPALTQIAVFSAAGLVGAYLSAVCLLPALLKGVELRPAQWPLRIAECLWRVRESLLK 420

Query: 423 RVRSSVLLVLVLAFCAGGLWHLTTKNDIRQWVSAPPQLMNEAQTIARITGYQPTSQFFLV 482
           RV S VLL LVL FCAGGLWHL +KNDIRQW+ APPQL+ EAQ +ARITG+QPTSQFFLV
Sbjct: 421 RVPSPVLLALVLLFCAGGLWHLNSKNDIRQWIGAPPQLLEEAQAVARITGFQPTSQFFLV 480

Query: 483 RAANQQQLLERQKALSDRLDQLVNLDKLKGYLALSQLVSLPSEQQQVREALNKLPAFWQP 542
           RA +++QLLERQ AL+ RLDQLVN+DKLKGYLAL+QLVSLP+EQQQ+R+ALN L   WQP
Sbjct: 481 RAQDERQLLERQSALAQRLDQLVNMDKLKGYLALNQLVSLPAEQQQLRDALNTLTQHWQP 540

Query: 543 LLDLGIPATALQTELTQLQALPVEDIDAALVGPLAEPWRPLWLGASDGGVAAMVSLQGLN 602
           LL LG+PA+ALQ E+TQLQALP + I+AALVGPLAEPWR LWLG  DGGVAAMVSLQGLN
Sbjct: 541 LLALGVPASALQAEVTQLQALPTQTIEAALVGPLAEPWRTLWLGPVDGGVAAMVSLQGLN 600

Query: 603 DTALLRVQALDLPGVQLVDRLDDLNKVFAATQISAAELKLMSCALIVLLLILPFGFGGAL 662
           + ALLRVQA+DLPGVQLVDRL DLN+VFA TQISAAELKLMSC LIVLLLILPFGFGGAL
Sbjct: 601 NPALLRVQAVDLPGVQLVDRLGDLNRVFADTQISAAELKLMSCVLIVLLLILPFGFGGAL 660

Query: 663 RLVALPLLAALCSLASLGWLGQPLTLFSVFGLLLVTAISVDYAILMREQIGGAAVSLLGT 722
           R+VALPLLAALCSLASLGWLGQPLTLFS+FGLLLVTAISVDYAILMREQIGG AVSLLGT
Sbjct: 661 RIVALPLLAALCSLASLGWLGQPLTLFSLFGLLLVTAISVDYAILMREQIGGPAVSLLGT 720

Query: 723 LLAAATTWLSFGLLAISSTPAVSNFGLSVSLGLAFSFILAPWAKPSAHA 771
           LLAA TTWLSFGLLA+SSTPAVSNFGLSVSLGLAFSF+LAPWA    HA
Sbjct: 721 LLAALTTWLSFGLLAVSSTPAVSNFGLSVSLGLAFSFMLAPWAGQQKHA 769



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 13/142 (9%)

Query: 648 IVLLLILPFGFGGALRLVALPLLAALC--SLASLGWLGQPLTLFSVFGLLLVTAISVDYA 705
           I+LLL+L F     L L  +P+L  +   ++A +   G    +  V G  L+  ++VDY 
Sbjct: 262 ILLLLLLAFRRWRVL-LAFVPVLVGMLFGAVACVALFGHMHVMTLVLGSSLI-GVAVDYP 319

Query: 706 I-------LMREQIGGAAVSLL--GTLLAAATTWLSFGLLAISSTPAVSNFGLSVSLGLA 756
           +        MR      A+ L   G  L+ AT+ + +  LA +  PA++   +  + GL 
Sbjct: 320 LHYLSKSWSMRPWRSWPALRLTLPGLSLSLATSCIGYLALAWTPFPALTQIAVFSAAGLV 379

Query: 757 FSFILAPWAKPSAHAAPVVEPA 778
            +++ A    P+      + PA
Sbjct: 380 GAYLSAVCLLPALLKGVELRPA 401