Pairwise Alignments

Query, 739 a.a., primosomal protein N' from Pseudomonas fluorescens FW300-N2E3

Subject, 732 a.a., Primosome factor n from Escherichia coli BL21

 Score =  678 bits (1750), Expect = 0.0
 Identities = 367/740 (49%), Positives = 482/740 (65%), Gaps = 18/740 (2%)

Query: 5   ILRLALPSPLRRLFDYRAPAGVLRAHLHPGMRLRVPFGRR-EMIGILVEVTSHSEVPADK 63
           +  +ALP PL R FDY  P G+    +  G R+RVPFG++ E IGI+V V+  SE+P ++
Sbjct: 3   VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59

Query: 64  LKPALALLDATPPLPASLFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAEARQERFWS 123
           LK  + +LD+ P    S+++L LW + YY H +GD L  ALP+LLRQG  A      +W 
Sbjct: 60  LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119

Query: 124 ITP-GAKLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKELVQVD 182
            T  G  +D   + R+P+Q++ALA L Q    +    ++ L  +  +L  L  K L   D
Sbjct: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLC--D 175

Query: 183 IRKHAP---GERHEHWLAQPELPLNPEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYL 239
           +    P     R  + ++   L LN EQ  A  AI +  D+F A+LLAGVTGSGKTEVYL
Sbjct: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235

Query: 240 QLIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDG 299
            ++   L  GKQALV++PEI L PQT+ARF +RFNA + ++HS +ND ERL +WL A++G
Sbjct: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295

Query: 300 EADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLG 359
           EA I+IGTRSALFTP KN G+I+IDEEHD SYKQQEG RYHARDLA+ RA  E IPI+LG
Sbjct: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355

Query: 360 SATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTL 419
           SATP+LE+L N    +Y LLRL  RAG A+      LD+K + + +G++  +   + Q L
Sbjct: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415

Query: 420 AAGQQVLVFLNRRGFAPTLLCHDCGWMSECQRCDARMTVHQRSGELRCHHCGYVERVPRH 479
            A  QV++FLNRRGFAP LLCHDCGW++EC RCD   T+HQ    LRCHHC     VPR 
Sbjct: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475

Query: 480 CPKCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCI 539
           CP CG   L PVG GTE+ E+ L  LFP  P+ R+DRD+TSRK A+ Q  A + +G   I
Sbjct: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535

Query: 540 LVGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVI 599
           L+GTQMLAKGHHFP VTLV++LD DG LFS DFR++ER AQL  QVAGRAGRA + G+V+
Sbjct: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595

Query: 600 IQTHLADHPLLVQLTEQGYFAFAEQALSERRSAGLPPFAHLALLRAEAHKPGQAEGFLDE 659
           +QTH  +HPLL  L  +GY AFAEQAL+ERR   LPP+    ++RAE H    A  FL +
Sbjct: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655

Query: 660 ACS--EAERLLDEHNLTGIELLGPVPAPMERRAGRYRAQLLLQASARAPLHRLLSAWLLA 717
             +   +  L DE     + +LGPVPA   +R GR+R Q+LLQ  +R  L  +++  L  
Sbjct: 656 LRNLILSSPLADEK----LWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711

Query: 718 LEQMPSGRAVRWSLDVDPVD 737
           +  +P  R V+W LDVDP++
Sbjct: 712 INTIPDSRKVKWVLDVDPIE 731