Pairwise Alignments

Query, 923 a.a., DNA polymerase I from Pseudomonas fluorescens FW300-N2E3

Subject, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

 Score = 1439 bits (3724), Expect = 0.0
 Identities = 742/923 (80%), Positives = 808/923 (87%), Gaps = 8/923 (0%)

Query: 1   MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD 60
           MSQAPLVLVDGSSYLYRAFHALPPLTTSKG+PTGAVKGVLNMLKSLRKQYPDS FAVVFD
Sbjct: 1   MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD 60

Query: 61  AKGGTFRDDLYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVDGVEADDVIGTLAR 120
           AKGGTFRD ++AEYKANRPSMPDD+RVQIEPLHASV ALG+PLLCV+GVEADDVIGTLAR
Sbjct: 61  AKGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLAR 120

Query: 121 SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDVAGVKEKFGVAPEQIIDYLALM 180
           SSAA  RPV+ISTGDKDMAQLVDGHITLVNTMTGS +DVAGV EKFGV PE IID+LALM
Sbjct: 121 SSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM 180

Query: 181 GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHKEM 240
           GD  DNIPGVPG+G KTA GLL G+ GGL++LYA LD VP L IRGAKTLPAKLEEH++ 
Sbjct: 181 GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDA 240

Query: 241 AFLSYQLATIKVDVPLDVGLDDLHLREPDREKLAELYTLLEFKSWFEEVQRDAKRAGQEV 300
           AFLSY+LATIKVDVPLDV ++ L   EPDRE L  LYT +EFKSW  E+QRDA +AG +V
Sbjct: 241 AFLSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQRDAAKAGDDV 300

Query: 301 VAAVEEAVADSDGPHYTTVLTQADFDVWLKKLQNATLFAFDTETTGIDAQQAQLVGLSFA 360
             AVE AV       Y T+L QA FD WL+KL+ A LFAFDTETTG+DAQQAQLVGLSFA
Sbjct: 301 APAVEPAVKVE--AKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQLVGLSFA 358

Query: 361 VQANEAAYIPLTHSYMGVPDQLDRDTVLRALKPILEDPSKLKVGQHAKFDMNILANCAIG 420
           V+ +EAAY+PL H Y G P QLDR+ VL ALKP+LEDP+K KVGQ+AK+D+NILAN    
Sbjct: 359 VEPHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLEDPAKAKVGQNAKYDINILAN---- 414

Query: 421 GDQSCGIMVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGYTTTSFQDIAGKGVKQLTF 480
              S  I ++G+A+DTMLESYVL+STATRHDMDSLA KYL +TT +F+DIAGKG KQLTF
Sbjct: 415 --GSPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTF 472

Query: 481 DQISLELAGPYAAEDADVTLRLHQTLHEKLDAIPSLSKVLSEIEMPLVPVLARIERQGAL 540
           +QI+L+ AGPYAAEDAD+TLRLH  L  +L   PS+  VL +IEMPLVPVLARIERQGAL
Sbjct: 473 NQINLDKAGPYAAEDADITLRLHHALQARLAQTPSVQPVLMDIEMPLVPVLARIERQGAL 532

Query: 541 VDANLLGIQSVELGDKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPILSKTAKGQ 600
           VDA LL +QS ELG K+  LE  A+ +AGE FNLGSPKQLG ILY+KLG+P+LSKTAKGQ
Sbjct: 533 VDAELLKVQSGELGVKMAELELRAYELAGETFNLGSPKQLGTILYDKLGMPVLSKTAKGQ 592

Query: 601 ASTAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAA 660
            STAEAVL ELA Q YPLP+VLMQYRSLSKLKSTYTD+LP QINPRTGRIHTSY QAVAA
Sbjct: 593 PSTAEAVLDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAA 652

Query: 661 TGRLSSSDPNLQNIPIRTAEGRRIRQAFIAPKGYKLLAADYSQIELRIMAHLAKDEGLLH 720
           TGRLSSSDPNLQNIPIRTAEGRRIRQAFIA  GYKLLAADYSQIELRIMAHLAKDEGLLH
Sbjct: 653 TGRLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLH 712

Query: 721 AFRNDLDVHKATAAEVFGVELADVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQ 780
           AFRNDLDVH+ATAAEVFGV L DVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQ
Sbjct: 713 AFRNDLDVHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQ 772

Query: 781 AYIDRYFARYPGVLEYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAIN 840
            YIDRYFARYPGVL YMERTRAQAAEQGFVET+FGRRLYLPDINAKNPALRKGAERTAIN
Sbjct: 773 DYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAIN 832

Query: 841 APMQGTAADIIKKAMVAVDNWLLTSGLDAKVILQVHDELVLEVREDLIDQVREEIRVHMS 900
           APMQGTAADIIK+AMV VDNWL  SGLDA+VILQVHDELVLEVREDL+ QV++EIR HMS
Sbjct: 833 APMQGTAADIIKRAMVKVDNWLSESGLDARVILQVHDELVLEVREDLVQQVKDEIRQHMS 892

Query: 901 SAATLDVPLLVEVGVGNNWDEAH 923
            AA LDVPLLVE GVG NWDEAH
Sbjct: 893 QAAQLDVPLLVEAGVGANWDEAH 915