Pairwise Alignments

Query, 923 a.a., DNA polymerase I from Pseudomonas fluorescens FW300-N2E3

Subject, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  820 bits (2117), Expect = 0.0
 Identities = 477/952 (50%), Positives = 604/952 (63%), Gaps = 57/952 (5%)

Query: 7   VLVDGSSYLYRAFHA--------LPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVV 58
           +LVDGSSYLYRAF A        LP  T  K   TGA++ ++NM++ LRK       A V
Sbjct: 1   LLVDGSSYLYRAFFAGGEAMSTTLPDGTVLK---TGAIRIMINMMQKLRKDVRADYAACV 57

Query: 59  FDAKGGTFRDDLYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVDGVEADDVIGTL 118
           FDAKG TFRD LY EYKANR  MPDD+R QI P+H  V  LG+ +L V GVEADDVIGTL
Sbjct: 58  FDAKGPTFRDALYPEYKANRSPMPDDLRAQIAPIHEVVKLLGWKVLDVPGVEADDVIGTL 117

Query: 119 ARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDVAGVKEKFGVAPEQIIDYLA 178
           A  +A      +IS+GDKD++QLV+ HIT+++TM     DVAGV  +FGV P  ++DY  
Sbjct: 118 AHLAAQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRRRDVAGVTAEFGVPPSLMLDYQT 177

Query: 179 LMGDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHK 238
           L+GD  DN+PGVP +GPKTA   L    G L  L A+        I+GA      L    
Sbjct: 178 LVGDQVDNVPGVPKVGPKTAVKWLQEY-GSLEALVARAG-----EIKGAAG--ENLRNAL 229

Query: 239 EMAFLSYQLATIKVDVPLDVGLDDLHLREP------DREKLAELYTLLEFKSWFEEV-QR 291
           +      +L TIK+D  L   ++ L   E       D E L        FK   + + Q 
Sbjct: 230 DWLPKGRELLTIKIDCDLQDHIEGLPSLEAITIAGQDSEALKAFGETYGFKGLVKSLTQH 289

Query: 292 DA--KRAGQEVVAAVEEAVADSDGP------------------HYTTVLTQADFDVWLKK 331
           D   +R  +  V A  +  A    P                   Y T+LT   FD WL++
Sbjct: 290 DVPPERIEESKVKAAAKGKAGDGSPGLFDEPDLSGSAERTTNLRYDTLLTWDQFDSWLQR 349

Query: 332 LQNATLFAFDTETTGIDAQQAQLVGLSFAVQANEAAYIPLTHSYMGVPDQLDRDTVLRAL 391
           LQ A L A DTETT +D  +A++VG+SF+V   EAAYIPL H+    P+QL  D VL  L
Sbjct: 350 LQAAELVALDTETTSLDEMRAEIVGISFSVTPGEAAYIPLRHAGPEAPEQLPFDEVLAKL 409

Query: 392 KPILEDPSKLKVGQHAKFDMNILANCAIGGDQSCGIMVQGIAFDTMLESYVLDSTATRHD 451
           KP LEDP+K K+GQH K+D ++ AN         GI VQG   DTML+SYVL+     H 
Sbjct: 410 KPWLEDPAKHKLGQHMKYDRHVFANH--------GIEVQGYVHDTMLQSYVLE-VHKPHG 460

Query: 452 MDSLALKYLGYTTTSFQDIAGKGVKQLTFDQISLELAGPYAAEDADVTLRLHQTLHEKLD 511
           + SLA ++LG    +++D+ GKG  Q+ F Q+ +  A  Y+ ED+D TL +H+ L  +L 
Sbjct: 461 LASLAERHLGRQGINYEDLCGKGAHQIPFAQVEVAKAAEYSCEDSDQTLDVHRVLWPQLQ 520

Query: 512 AIPSLSKVLSEIEMPLVPVLARIERQGALVDANLLGIQSVELGDKLVALEREAFAIAGEE 571
           A   L + + E+E+     L RIER G L+DA  L  QS ELG ++VALE+EA+AIAG+ 
Sbjct: 521 ADEKL-RFIYELEIASSEALYRIERNGVLIDAPTLAAQSHELGQRIVALEQEAYAIAGQP 579

Query: 572 FNLGSPKQLGVILYEKLGLPILSKTAKGQASTAEAVLAELAEQDYPLPKVLMQYRSLSKL 631
           FNLGSPKQLG I ++KLGLP++ KTA G  ST E VL +LAE DYPLP  ++++RSL+KL
Sbjct: 580 FNLGSPKQLGEIFFDKLGLPVIKKTATGARSTDEEVLEKLAE-DYPLPAKILEHRSLAKL 638

Query: 632 KSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIAP 691
           K TYTD+L +   PRTGR+HT Y QAVA TGRLSS+DPNLQNIPIRT EGRR+R+AF+AP
Sbjct: 639 KGTYTDKLAQLALPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAP 698

Query: 692 KGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLDVHKATAAEVFGVELADVTTDQRRS 751
            G  + +ADYSQIELRIMAH++ DE LL AF   LDVH+ATAAEVFGVE A V+++QRR 
Sbjct: 699 AGSVIASADYSQIELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGVETAQVSSEQRRY 758

Query: 752 AKAINFGLIYGMSAFGLAKQIGVDRKQSQAYIDRYFARYPGVLEYMERTRAQAAEQGFVE 811
           AK INFGLIYGM +FGLAK +G+D   ++ YI RYF R+ GV  YM+ TR +A + G++E
Sbjct: 759 AKVINFGLIYGMGSFGLAKALGIDNTAAKNYITRYFERFEGVKRYMDETRQRAKDMGYIE 818

Query: 812 TIFGRRLYLPDINAKNPALRKGAERTAINAPMQGTAADIIKKAMVAVDNWLLTSGLDAKV 871
           T+FGRRL LPDI     A     ER AINAPMQGTAAD+IK +MVAV   L       K+
Sbjct: 819 TVFGRRLVLPDIKNAKGAKLSALERQAINAPMQGTAADLIKLSMVAVQKALDEQRRSTKM 878

Query: 872 ILQVHDELVLEVREDLIDQVREEIRVHMSSAATLDVPLLVEVGVGNNWDEAH 923
           I+QVHDELV EV E  +D ++ EI   M+  A L VPLL EVGVG NWD+AH
Sbjct: 879 IMQVHDELVFEVPEGEVDWLKTEIPHLMAGVAALKVPLLAEVGVGPNWDKAH 930