Pairwise Alignments

Query, 923 a.a., DNA polymerase I from Pseudomonas fluorescens FW300-N2E3

Subject, 928 a.a., 5 from Escherichia coli BL21

 Score = 1063 bits (2748), Expect = 0.0
 Identities = 561/933 (60%), Positives = 684/933 (73%), Gaps = 22/933 (2%)

Query: 3   QAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFDAK 62
           Q PL+LVDGSSYLYRA+HA PPLT S G PTGA+ GVLNML+SL  QY  +  AVVFDAK
Sbjct: 6   QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65

Query: 63  GGTFRDDLYAEYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVDGVEADDVIGTLARSS 122
           G TFRD+L+  YK++RP MPDD+R QIEPLHA V A+G PLL V GVEADDVIGTLAR +
Sbjct: 66  GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125

Query: 123 AAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDVAGVKEKFGVAPEQIIDYLALMGD 182
             A RPV+ISTGDKDMAQLV  +ITL+NTMT + +    V  K+GV PE IID+LALMGD
Sbjct: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185

Query: 183 SSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVPTLPIRGAKTLPAKLEEHKEMAF 242
           SSDNIPGVPG+G KTA  LL G+ GGL  LYA+ + +  L  RGAKT+ AKLE++KE+A+
Sbjct: 186 SSDNIPGVPGVGEKTAQALLQGL-GGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244

Query: 243 LSYQLATIKVDVPLDVGLDDLHLREPDREKLAELYTLLEFKSWFEEVQRDA--KRAGQEV 300
           LSYQLATIK DV L++  + L +++P  E+L  L+   EFK W  +V+     +  G + 
Sbjct: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304

Query: 301 VAAVEEAVADSDGP----------HYTTVLTQADFDVWLKKLQNATLFAFDTETTGIDAQ 350
            A  +E     + P          +Y T+L +     W+ KL+ A +FAFDTET  +D  
Sbjct: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364

Query: 351 QAQLVGLSFAVQANEAAYIPLTHSYMGVPDQLDRDTVLRALKPILEDPSKLKVGQHAKFD 410
            A LVGLSFA++   AAYIP+ H Y+  PDQ+ R+  L  LKP+LED   LKVGQ+ K+D
Sbjct: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424

Query: 411 MNILANCAIGGDQSCGIMVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGYTTTSFQDI 470
             ILAN         GI ++GIAFDTMLESY+L+S A RHDMDSLA ++L + T +F++I
Sbjct: 425 RGILANY--------GIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476

Query: 471 AGKGVKQLTFDQISLELAGPYAAEDADVTLRLHQTLHEKLDAIPSLSKVLSEIEMPLVPV 530
           AGKG  QLTF+QI+LE AG YAAEDADVTL+LH  +   L        V   IEMPLVPV
Sbjct: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536

Query: 531 LARIERQGALVDANLLGIQSVELGDKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGL 590
           L+RIER G  +D  +L   S EL  +L  LE++A  IAGEEFNL S KQL  IL+EK G+
Sbjct: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596

Query: 591 PILSKTAKGQASTAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINPRTGRI 650
             L KT  G  ST+E VL ELA  DYPLPKV+++YR L+KLKSTYTD+LP  INP+TGR+
Sbjct: 597 KPLKKTPGGAPSTSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655

Query: 651 HTSYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIAPKGYKLLAADYSQIELRIMA 710
           HTSYHQAV ATGRLSS+DPNLQNIP+R  EGRRIRQAFIAP+ Y +++ADYSQIELRIMA
Sbjct: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMA 715

Query: 711 HLAKDEGLLHAFRNDLDVHKATAAEVFGVELADVTTDQRRSAKAINFGLIYGMSAFGLAK 770
           HL++D+GLL AF    D+H+ATAAEVFG+ L  VT++QRRSAKAINFGLIYGMSAFGLA+
Sbjct: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775

Query: 771 QIGVDRKQSQAYIDRYFARYPGVLEYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPAL 830
           Q+ + RK++Q Y+D YF RYPGVLEYMERTRAQA EQG+VET+ GRRLYLPDI + N A 
Sbjct: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835

Query: 831 RKGAERTAINAPMQGTAADIIKKAMVAVDNWLLTSGLDAKVILQVHDELVLEVREDLIDQ 890
           R  AER AINAPMQGTAADIIK+AM+AVD WL       ++I+QVHDELV EV +D +D 
Sbjct: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895

Query: 891 VREEIRVHMSSAATLDVPLLVEVGVGNNWDEAH 923
           V ++I   M +   LDVPLLVEVG G NWD+AH
Sbjct: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928