Pairwise Alignments

Query, 393 a.a., MFS transporter from Pseudomonas fluorescens FW300-N2E3

Subject, 454 a.a., putative transporter from Escherichia coli BL21

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 90/388 (23%), Positives = 167/388 (43%), Gaps = 37/388 (9%)

Query: 13  RTIWALGFVSLFMDVSSELVHSLLPVFLVTTLGASALTVGVIEGIAEATAMVVKVFSGAI 72
           R  W LG V     +   +V  +L  + +   GAS   +G+  GI   T  V ++  G +
Sbjct: 12  RATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLL 71

Query: 73  SDFIGRRKGLLLVGYGMAALSKPLFPLAHSVDVVFTARFLDRIGKGIRGSPRDALVADVA 132
           SD IGR K L++ G  + A    +  L+ S+  +   R L   G G   +   AL++D+ 
Sbjct: 72  SDRIGR-KPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQ--GSGAIAAAVMALLSDLT 128

Query: 133 PPEIRGACFGLRQSMDTVGAFVGPALAIALMLW-----LADIQLVLWFAVIPAVIAVALI 187
             + R       ++M  +G   G   AIA++L         +  + W   I A   +AL 
Sbjct: 129 REQNR------TKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALT 182

Query: 188 V-------AGVKEPEHAVGKHTFRSPIHWRVLHDFSSGYWWVVIVGGVFTLARFSEAFLV 240
           +         V   E  + K +F   +    L   + G   + ++            F+ 
Sbjct: 183 IWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHML--------LMSTFVA 234

Query: 241 LRAQ--QAGLSAT--WVPLVMVVMSVFYALSAYPA-GWLSDRISRTKLLCLGMGLLVLAD 295
           L  Q   AG  A   W   +  ++  F ++  +     +  ++ +  + C+G  L+V+A+
Sbjct: 235 LPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVG--LIVVAE 292

Query: 296 LVLAQSHSPL-TMMLGVALWGLHMGFSQGILATLVADTAPDELKGTAFGIFNLLSGVCLL 354
           +VL  + +    +++GV L+ +     + +L +L++  +P   KGTA G+++    + + 
Sbjct: 293 IVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVA 352

Query: 355 IASVLAGWLWQTVGAQSTFITGAVLAAL 382
           I   L GW+      Q  F+ GA+LAA+
Sbjct: 353 IGGSLGGWIDGMFDGQGVFLAGAMLAAV 380



 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 225 VGGVFTLARFSEAFLVLRAQQA------GLSATWVPLVMVVMSVFYALSAYPAGWLSDRI 278
           +G VF+L R    F+VL           G S   + + + +  +  A+   P G LSDRI
Sbjct: 17  LGTVFSL-RMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRI 75

Query: 279 SRTKLLCLGMGLLVLADLVLAQSHSPLTMMLGVALWGLHMGFSQGILATLVADTAPDELK 338
            R  L+  G+ +     ++ A S S   ++LG AL G   G     +  L++D   ++ +
Sbjct: 76  GRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQG--SGAIAAAVMALLSDLTREQNR 133

Query: 339 GTAFGIFNLLSGVCLLIASVLAGWLWQTVGAQSTFITGAVLAALAMLLLL 388
             A     +  G+   IA VL   +   +G  + F   A+LA   + L +
Sbjct: 134 TKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTI 183