Pairwise Alignments

Query, 239 a.a., 16S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Escherichia coli ECRC100

 Score =  206 bits (523), Expect = 4e-58
 Identities = 114/241 (47%), Positives = 148/241 (61%), Gaps = 3/241 (1%)

Query: 1   MRLSRFFIDAPLSLGEH-ELPEAQAHYISRVLRMAEGDALQVFDGSGQEFRGTLAEVGKK 59
           MR+ R +   PL+   H  L E  A++I RVLRM  G ALQ+FDGS Q F   +    KK
Sbjct: 1   MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKK 60

Query: 60  RVRVALTESFAGQIESPLQIHLGQGLSRGERMDWAIQKATELGVTEITPIFSDRCEVRLK 119
            V V + E      ESPL IHLGQ +SRGE+M++ IQK+ ELGV+ ITP+FS+RC V+L 
Sbjct: 61  SVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD 120

Query: 120 DERADKRLQHWRQVAISACEQCGRSRVPVIHPPLLLADWLKQSEAELKLVLHPVAEPLVS 179
            ER +K+LQ W+++AI+ACEQCGR+RVP I P + L  W  + +  LKL LHP A   ++
Sbjct: 121 SERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSIN 180

Query: 180 --HAKPSTLAFLIGPEGGLSDVEVDQAQSAGFHSARLGPRVLRTETAPVVALAVAQQLWG 237
                   +  LIGPEGGLS  E+       F    LGPRVLRTET  + A+   Q  +G
Sbjct: 181 TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG 240

Query: 238 D 238
           D
Sbjct: 241 D 241