Pairwise Alignments

Query, 239 a.a., 16S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 259 a.a., Ribosomal RNA small subunit methyltransferase E from Azospirillum sp. SherDot2

 Score =  112 bits (281), Expect = 5e-30
 Identities = 83/245 (33%), Positives = 126/245 (51%), Gaps = 17/245 (6%)

Query: 4   SRFFIDAPLSLGEHE-LPEAQAHYISRVLRMAEGDALQVFDGSGQEFRGTLAEVGKKRVR 62
           +R ++D+PL+ G+   L   +AH++  VLR+  GD++ VF+G   E+R  +   GK    
Sbjct: 7   TRLYVDSPLAEGQSVGLDHERAHFLRHVLRLDRGDSVAVFNGRDGEWRAVIDGFGKGWCS 66

Query: 63  VALTESFAGQIESPLQIHLGQGLSRGERMDWAIQKATELGVTEITPIFSDRCEVRLKDER 122
           + + E    Q  +P    +   L +G R+D+  +KATE+GV+ + P+F+ R +    +  
Sbjct: 67  LTVAEQRREQDTTPDLWLVFAPLKKG-RIDFVAEKATEMGVSRLWPVFTRRTDPNRVN-- 123

Query: 123 ADKRLQHWRQVAISACEQCGRSRVPVIHPPLLLADWLKQSEAELKLVL-------HPVAE 175
               L   R  A+ A EQC R  VP +   + L   L    A+ +L L        PVAE
Sbjct: 124 ----LDRLRANAVEAAEQCERLSVPEMGEAVPLDRALAGWPADRRLYLCAEAGAARPVAE 179

Query: 176 PLVSHAKPSTLAFLIGPEGGLSDVEVDQAQSAGF-HSARLGPRVLRTETAPVVALAVAQQ 234
            ++  A P   A L+GPEGG    E+D+     F     LGPR+LR +TA V ALA  Q 
Sbjct: 180 -VLRDAPPGPAALLVGPEGGFDQSELDELAKLPFVVPVGLGPRILRADTAVVAALACWQS 238

Query: 235 LWGDF 239
           L GD+
Sbjct: 239 LAGDW 243