Pairwise Alignments

Query, 272 a.a., rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 254 a.a., SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  208 bits (529), Expect = 1e-58
 Identities = 116/255 (45%), Positives = 168/255 (65%), Gaps = 9/255 (3%)

Query: 6   QHRARKRFGQNFLHDAGVIDRILRSIHAKPDDRLLEIGPGQGALTEGLLNSGAQLDVVEL 65
           +H ARKRFGQ+FL D+ +ID I+ +I   P D ++EIGPG  ALT+ L+    +L V+EL
Sbjct: 2   KHIARKRFGQHFLTDSAIIDAIVAAIAPAPGDAMVEIGPGLAALTQPLVERLGRLTVIEL 61

Query: 66  DKDLIPILNQQFAGKSNFNLHQGDALKFDFNSLNAAPNS--LRVVGNLPYNISTPLIFHL 123
           D+DL   L +        ++ + D LK DF++L    ++  LRVVGNLPYNISTP++FHL
Sbjct: 62  DRDLAVRLREH----GQLDVIESDVLKVDFSALAGRLDNGHLRVVGNLPYNISTPILFHL 117

Query: 124 LNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPSAFNPPPK 183
           L++  +++D HFMLQKEV++R+ A P   D+GRLS+M+Q+   ++++  V P +F+PPP+
Sbjct: 118 LDHVDVVKDQHFMLQKEVIDRMVAQPATADYGRLSVMLQWRYAMDNVLFVPPESFDPPPR 177

Query: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKALLSNAEIEAAGVDGS 243
           VDSAIVR+VP AV   PA D      +V+ AF+QRRK LRNTL   L      +   D  
Sbjct: 178 VDSAIVRMVPLAV--PPALDVVRYGAIVQVAFSQRRKILRNTLGRWLDEQGF-SGEFDLQ 234

Query: 244 LRPEQLDLAAFVRLA 258
            R E++ ++ +V LA
Sbjct: 235 RRAEEVPVSEYVALA 249