Pairwise Alignments

Query, 272 a.a., rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

Subject, 273 a.a., SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  255 bits (652), Expect = 6e-73
 Identities = 134/261 (51%), Positives = 175/261 (67%), Gaps = 1/261 (0%)

Query: 4   HYQHRARKRFGQNFLHDAGVIDRILRSIHAKPDDRLLEIGPGQGALTEGLLNSGAQLDVV 63
           H  H ARKRFGQNFL+D  VID I+ +I+ +    ++EIGPG  ALTE +     +L V+
Sbjct: 6   HQGHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDKLTVI 65

Query: 64  ELDKDLIPILNQQFAGKSNFNLHQGDALKFDFNSLNAAPNS-LRVVGNLPYNISTPLIFH 122
           ELD+DL   L           ++Q DA+  +F  L+A     LRV GNLPYNISTPL+FH
Sbjct: 66  ELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVFGNLPYNISTPLMFH 125

Query: 123 LLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPSAFNPPP 182
           L +    I DMHFMLQKEVV RL AGP   ++GRLS+M QY+C+V  +  V PSAF PPP
Sbjct: 126 LFSYTDAIADMHFMLQKEVVNRLVAGPNSKEYGRLSVMAQYYCQVIPVLEVPPSAFTPPP 185

Query: 183 KVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKALLSNAEIEAAGVDG 242
           KVDSA+VRLVPHA +P+P KD R+L R+  EAFNQRRKT+RN+L  L S   +   G+D 
Sbjct: 186 KVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNSLGNLFSVETLTEMGIDP 245

Query: 243 SLRPEQLDLAAFVRLADKLSE 263
           ++R E + +A + ++A+ LSE
Sbjct: 246 AMRAENISVAQYCQMANYLSE 266