Pairwise Alignments

Query, 232 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 212 a.a., outer membrane protein W (NCBI) from Escherichia coli BW25113

 Score =  169 bits (428), Expect = 4e-47
 Identities = 95/232 (40%), Positives = 132/232 (56%), Gaps = 23/232 (9%)

Query: 3   KSLLSASLIAFALAPPFAQAHEAGDIIVRAGAITVNPTAGSSSVKVDRGPLAGADLG--G 60
           K L  A+L    L    A AHEAG+  +RAG+ TV PT G           AG  LG  G
Sbjct: 2   KKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEG-----------AGGTLGSLG 50

Query: 61  KATMDSSTQLGLNFAYMLTPDIGIELLAASPFQHDVNLKGTSLGAANGKLGTLKHLPPTL 120
             ++ ++TQLGL F YM T +IG+ELLAA+PF+H +  + T      G + T+ HLPPTL
Sbjct: 51  GFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRAT------GDIATVHHLPPTL 104

Query: 121 SVVYYPLNNKSAFQPYVGAGINYTWIYDEKLSNEAQANGFSNFKTKNSWGLAWQVGADYM 180
              +Y  +  S F+PYVGAGINYT  +D   ++  +  G S+   K+SWG A QVG DY+
Sbjct: 105 MAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYL 164

Query: 181 LTDHIMLNGQVRYIDIDTTGYVDNNAVAPGTRAKVNIDVDPWIYMVGLGYKF 232
           +    ++N  V Y+DIDTT     N    G +   ++ +DPW++M   GY+F
Sbjct: 165 INRDWLVNMSVWYMDIDTTA----NYKLGGAQQHDSVRLDPWVFMFSAGYRF 212