Pairwise Alignments

Query, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas fluorescens FW300-N2E3

Subject, 400 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) from Escherichia coli BW25113

 Score =  331 bits (848), Expect = 2e-95
 Identities = 172/376 (45%), Positives = 245/376 (65%), Gaps = 8/376 (2%)

Query: 17  LLSPAAFAVEMMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLPPASLTKLMTAYIATLE 76
           L +P AFA E     P + A++++LMD +SG VL E N D++L PASLTK+MT+Y+    
Sbjct: 20  LFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQA 79

Query: 77  IRRGQIGENDPVTVSENAWRTGG------SRMFIKVGSQVTVSDLLHGIIIQSGNDASVA 130
           ++  +I   D VTV ++AW TG       S MF+K G QV+V+DL  G+IIQSGNDA +A
Sbjct: 80  LKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIA 139

Query: 131 LSEHIAGSEDAFADLMNKTVADLGMNNSHFMNPTGLPNPEHYSTAHDMAILARAIIHEDP 190
           L++++AGS+++F  LMN     LG+ N+ F    GL  P  +STA DMA+L +A+IH+ P
Sbjct: 140 LADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVP 199

Query: 191 AHYAIYSQKEFFWNGIKQPNRNLLLWRDK-TVDGLKTGHTEEAGYCMVSSAVRDGMRLIA 249
             YAI+ +KEF +N I+QPNRN LLW     VDG+KTG T  AGY +V+SA +  MRLI+
Sbjct: 200 EEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLIS 259

Query: 250 VVFGTNSESARAAETQKLLTYGFRFFETQTFYQKGAELAQAPVWKGTTNQVKAGLAEDLT 309
           VV G  ++  R  E++KLLT+GFRFFET T  +  A      VW G  ++V  G  E  +
Sbjct: 260 VVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGS 319

Query: 310 MTLPKGQLKKLAASMTM-NPQLVAPIAKGDVIGKVEVKLDDKVVHSADLIALDAVDQGGI 368
           +T+P+GQLK L AS T+  PQL AP+ KG V+G ++ +L+ K +    LI ++ V++GG 
Sbjct: 320 VTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGF 379

Query: 369 FRRMWDSIRLFFYGLF 384
           F R+WD + + F+  F
Sbjct: 380 FGRVWDFVMMKFHQWF 395