Pairwise Alignments

Query, 385 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas fluorescens FW300-N2E3

Subject, 403 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) from Escherichia coli BW25113

 Score =  319 bits (817), Expect = 1e-91
 Identities = 166/366 (45%), Positives = 236/366 (64%), Gaps = 8/366 (2%)

Query: 27  MMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRGQIGEND 86
           M+P  PQ+ A+SY+L+D +SG VL E N D R  PASLTK+MT+Y+    ++ G+  E D
Sbjct: 37  MIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETD 96

Query: 87  PVTVSENAWRTGG------SRMFIKVGSQVTVSDLLHGIIIQSGNDASVALSEHIAGSED 140
            VT+  +AW TG       S MF+K G QV VS L+ GI +QSGNDA VA+++  AGS+D
Sbjct: 97  LVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQD 156

Query: 141 AFADLMNKTVADLGMNNSHFMNPTGLPNPEHYSTAHDMAILARAIIHEDPAHYAIYSQKE 200
           AF  LMN  V  LG+ N+HF    GL     YS+A DMA++ +A+I + P  Y+IY +KE
Sbjct: 157 AFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKE 216

Query: 201 FFWNGIKQPNRNLLLWRDK-TVDGLKTGHTEEAGYCMVSSAVRDGMRLIAVVFGTNSESA 259
           F +NGI+Q NRN LLW +   VDG+KTGHT++AGY +V+SA    MRLI+ V G  +   
Sbjct: 217 FTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG 276

Query: 260 RAAETQKLLTYGFRFFETQTFYQKGAELAQAPVWKGTTNQVKAGLAEDLTMTLPKGQLKK 319
           R AE++KLLT+GFRFFET    + G E A  PVW G +++   G+ +D+ +T+P+G++K 
Sbjct: 277 REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKD 336

Query: 320 LAASMTMN-PQLVAPIAKGDVIGKVEVKLDDKVVHSADLIALDAVDQGGIFRRMWDSIRL 378
           L AS  +N  +L AP+ K  V+G +  +LD K +    L+ L  + +G  F ++ D I+L
Sbjct: 337 LKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIIDYIKL 396

Query: 379 FFYGLF 384
            F+  F
Sbjct: 397 MFHHWF 402