Pairwise Alignments

Query, 1229 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas fluorescens FW300-N2E3

Subject, 1224 a.a., Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease from Pseudomonas putida KT2440

 Score = 1666 bits (4314), Expect = 0.0
 Identities = 841/1220 (68%), Positives = 956/1220 (78%), Gaps = 10/1220 (0%)

Query: 1    MTAKVPLALAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGDESAGFGRELLPPQILV 60
            MT   PLAL+FPL GSQLIEASAGTGKTFTISALYLRL+LGHG E  GF RELLPPQILV
Sbjct: 1    MTQDRPLALSFPLHGSQLIEASAGTGKTFTISALYLRLILGHGGEQ-GFERELLPPQILV 59

Query: 61   VTFTDAATKELRERIRTRLAEAARFFRDETPAPDSLIAELRGQFSPEQWSGCANRLDIAA 120
            VTFTDAATKELRERIR RLAEAARFFR E    D L+ +LR  +  E W  CA RL+IA 
Sbjct: 60   VTFTDAATKELRERIRARLAEAARFFRGELEGADPLLHQLRDDYPQENWPRCAGRLEIAV 119

Query: 121  QWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLEVDHSNLLGEVLRDYWRLFCYPMQGD 180
            QWMDEAAVSTIH WCQRMLREHAFDSGSLFTQTLE DHS LLG+V+RDYWR FCY MQGD
Sbjct: 120  QWMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHSELLGQVMRDYWRRFCYGMQGD 179

Query: 181  ALNWVRSHWGGPAALLSRVRGLFASERDSAEGKEPAELITECLQARRDALLELKAPWRQW 240
            AL WVR +WG P ALL R+R LF   R    G EPA LI   LQ R   L  +KAPW QW
Sbjct: 180  ALAWVRGNWGSPDALLPRIRPLFGRVRAQQNGPEPAALIQASLQQRGAQLARIKAPWAQW 239

Query: 241  AQELREICLQGVASKSVDGRKMQARYFEPWFEKICTWAEDDGLEQLDIGTGFNRLTPDGM 300
            A+ELR+IC   +A+K VDGRKMQARYFEPWF+K+C WA D+ L +LD+GTGF RLTP GM
Sbjct: 240  AEELRQICRDALAAKQVDGRKMQARYFEPWFDKLCAWASDEQLVELDLGTGFTRLTPAGM 299

Query: 301  AEAWKGQAPSHPGLDAMSGLKASLDALPTPDAAVLKHAAQWVGARFEEEKRRRAEMGFDD 360
            AEAWKG+ P HP L+AM  L+  L AL +PDA +L+HAA WV ARFE EKRRRAEMGFDD
Sbjct: 300  AEAWKGEPPEHPALNAMQHLQQQLQALDSPDAPLLEHAASWVSARFEVEKRRRAEMGFDD 359

Query: 361  MLLRLDAALRAEGGERLATLIREQFPVALIDEFQDTDPVQYWIFESIYRIEDNNPECGLF 420
            ML+RL  AL +E GERLA+LIREQFPVALIDEFQDTDPVQY IFE IY+I +N  E GLF
Sbjct: 360  MLVRLQHALASEAGERLASLIREQFPVALIDEFQDTDPVQYGIFERIYQISENRAETGLF 419

Query: 421  LIGDPKQAIYAFRGADIYTYLRARQATSGRLHTLGTNFRSSHGMVDAVNHVFQRAEAREQ 480
            +IGDPKQAIYAFRGADIYTYL AR+ATSGRLH+L TN+RSS  MV AVN VF +AEARE 
Sbjct: 420  MIGDPKQAIYAFRGADIYTYLAARRATSGRLHSLDTNYRSSKAMVAAVNQVFLQAEAREA 479

Query: 481  GRGAFLFREKNGENPVPFLPVESQGRKESLQINGQAVPALNIWQLSSEQPLSGVVYRQQL 540
            GRGAFLFRE + +NP+PF+ V ++GR E L I+G+   AL  WQL SE+P+S  VYRQQ+
Sbjct: 480  GRGAFLFREAD-DNPLPFIEVRAKGRGEQLLIDGEVSAALQCWQLESEEPVSSSVYRQQM 538

Query: 541  AAACASEITALLNGGQQGRAGFVRGAEDLQGLLPADIAILVRDGKEAQAVRNELSVRGVR 600
            AA+CAS I ALLNGGQQG +GF     +L+  LP+DIAILVRDG EAQ VR EL+ R VR
Sbjct: 539  AASCASHIVALLNGGQQGTSGFRNAEGELRACLPSDIAILVRDGHEAQMVRAELAAREVR 598

Query: 601  SVYLSDKDSVFAAQEAHDLLSWLKACAEPDVERPLRAALASITLNLSLTELERLNQDELA 660
            SVYLSDKDSVFAAQEAHDLL+WLKACAEPD ER L+AALAS+TL LSL  L+RLNQDE  
Sbjct: 599  SVYLSDKDSVFAAQEAHDLLAWLKACAEPDSERLLKAALASLTLGLSLAALDRLNQDERV 658

Query: 661  WEKRVMQFREYRVIWRSQGILPMLRRLLHDFELPQALIARSDGERILTNLLHLSELLQQA 720
            WE  VM+FR YR  W+ QG+LPMLR LLHDF+LP+ LI RSDGER+LTNLLHL+ELLQQA
Sbjct: 659  WESWVMRFRLYRDTWQRQGVLPMLRHLLHDFQLPRTLIRRSDGERVLTNLLHLAELLQQA 718

Query: 721  AAELDGEQALIRHLSEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVFLPFI 780
            A ELDGEQALIRHL+EHLA SGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLV+LPFI
Sbjct: 719  AGELDGEQALIRHLAEHLASSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVYLPFI 778

Query: 781  CSAKPVDGSRLPMHYHDANGQAQITLSPTPELIALADDERLAEDLRLLYVALTRAQHACW 840
            C++KPVDGSRLP+ +HD+ G A +TL+P  E I  ADDERLAEDLRLLYVALTRAQHACW
Sbjct: 779  CTSKPVDGSRLPLAWHDSEGNAHLTLTPDQEQIERADDERLAEDLRLLYVALTRAQHACW 838

Query: 841  LGVTDLKRGNNNSSVLHLSALGYLLGGGEKLVESTALKRWLEDLQQNCSALSYGEMPEAT 900
            LGV DLKRGN  SS LH SA GYLLGGG  L  S  L  WL+ L  +C  ++   +P+A 
Sbjct: 839  LGVADLKRGNLKSSQLHRSAFGYLLGGGLALAGSAQLTDWLQALAASCPHITCPGLPQAD 898

Query: 901  TERFLPPRNEATLLAPLIPKRKAAENWWIASYSALRIGDSLSAGSDEAPESPQAQKLFDD 960
             + +  P  E  LL    P+  AAE+WWIASYSALR+GD  + G+D    S QAQ+L DD
Sbjct: 899  EQMYRMPHAERELLPARRPRHAAAEHWWIASYSALRVGDQ-TLGAD----SSQAQQLLDD 953

Query: 961  ERLDPDAPREVLASGGDIHRFPRGPNPGTFLHGLLEWAGDEGF---AADPKSIENAIARR 1017
            E  D    REV A  GDIHRFPRGPNPGTFLHGLLEWAG EGF   +A+P+ IE  + +R
Sbjct: 954  EVPDAQVLREVPADSGDIHRFPRGPNPGTFLHGLLEWAGREGFSEVSANPQLIERTVGQR 1013

Query: 1018 CNRRGWEGWINTLSDWLQHLLQAPLRIGTEQPPVVFEQLTEYRVEMEFWFASHKVDVLKL 1077
            CNRR W GWI TLS W+Q LL   L +      V   QL  Y++EMEFWFASH+VD  +L
Sbjct: 1014 CNRRDWAGWIPTLSHWMQRLLSEALPLPGSDQSVTLGQLRHYQIEMEFWFASHRVDAEQL 1073

Query: 1078 DELVRQYTHAGASRVVAEPVLLNGMFKGFIDLTFEHAGRYYVADYKSNWLGADDSAYTEQ 1137
            D LV ++TH G +R  A+P +LNGMFKGFIDL FE  GRYYV DYKSNWLGAD  AY   
Sbjct: 1074 DRLVARHTHPGLARPAAQPTVLNGMFKGFIDLAFELDGRYYVTDYKSNWLGADIQAYDAM 1133

Query: 1138 AMEQSMLDHRYDLQYVLYLLALHRQLKARLADYDYDRHMGGALYLFLRGTRAPGQGVYFT 1197
            AME+++L+HRYDLQYVLYLLALHRQL+ARLADYDYDRH+GGAL++FLRG  + G GVY  
Sbjct: 1134 AMEKAILEHRYDLQYVLYLLALHRQLRARLADYDYDRHVGGALFIFLRGASSSGHGVYHA 1193

Query: 1198 RPPRELIERLDRLFQGKPEP 1217
            +PPRELIE LD LF+G+  P
Sbjct: 1194 KPPRELIESLDALFRGEHAP 1213