Pairwise Alignments

Query, 1229 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas fluorescens FW300-N2E3

Subject, 1181 a.a., Exodeoxyribonuclease V beta chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  777 bits (2007), Expect = 0.0
 Identities = 513/1231 (41%), Positives = 694/1231 (56%), Gaps = 91/1231 (7%)

Query: 9    LAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGDESAGFGRELLPPQILVVTFTDAAT 68
            L  PL G +LIEASAGTGKTFTI+ALYLRL+LG G  SA F R L   ++LVVTFT+AAT
Sbjct: 11   LRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGG-SAAFPRPLTVEELLVVTFTEAAT 69

Query: 69   KELRERIRTRLAEAA-RFFRDETPAP--DSLIAELRGQFSPEQWSGCANRLDIAAQWMDE 125
            +ELR RIR+ + E      R+ T  P    L+ E+  +    QW      L +A + MDE
Sbjct: 70   EELRGRIRSNIHELRIACLRESTDNPLYARLLEEISDKKQAAQW------LLLAERQMDE 123

Query: 126  AAVSTIHSWCQRMLREHAFDSGSLFTQTLEVDHSNLLGEVLRDYWRLFCYPMQGDALNWV 185
            AAV TIH +CQRML  +AF+SG LF Q L  D S L  +   D+WR  CYP+  D    V
Sbjct: 124  AAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIAQVV 183

Query: 186  RSHWGGPAALLSRVRGLFASERDSAEGKEPAELITECLQARRDALL----ELKAPWRQWA 241
               W GP ALL  +      E    +     E   E L +R + +L    ++K  W +  
Sbjct: 184  FDVWKGPKALLKDIDRYLQGEAPVIKAPPSQE---ETLASRHEQILARINQVKQQWCEAV 240

Query: 242  QELREICLQGVASKSVDGRKMQARYFEPWFEKICTWAEDDGLEQLDIGTGFNRLTPDGMA 301
             EL  +    + S  +D RK        W EKI  WA+++  +   +     + +   +A
Sbjct: 241  SELDAL----IESSGIDRRKFNRGNQAKWIEKITAWAQEE-TKNYQLPEALGKFSQRFLA 295

Query: 302  EAWK--GQAPSHP---GLDAMSGLKASLDALPTPDAAVLKHAAQWVGARFEEEKRRRAEM 356
            E  K  G  P HP    +D + G   S+  L      VL  A   +     +EKRRR E+
Sbjct: 296  ERTKAGGVTPQHPLFVAIDNLLGEPLSIKDL------VLTRALSEIRETVAQEKRRRGEL 349

Query: 357  GFDDMLLRLDAALRAEGGERLATLIREQFPVALIDEFQDTDPVQYWIFESIYRIEDNNPE 416
            GFDDML RLD ALR+E GE LA  IR +FPVA+IDEFQDTDP QY IF  I+R   + P+
Sbjct: 350  GFDDMLSRLDTALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWR---HQPD 406

Query: 417  CGLFLIGDPKQAIYAFRGADIYTYLRARQATSGRLHTLGTNFRSSHGMVDAVNHVFQRAE 476
              L LIGDPKQAIYAFRGADI+TY++AR   S   +TL TN+RS+ GMV++VN +F    
Sbjct: 407  TALLLIGDPKQAIYAFRGADIFTYMKARSEVSAH-YTLDTNWRSAPGMVNSVNKLFS--- 462

Query: 477  AREQGRGAFLFREKNGENPVPFLPVESQGRKESLQ--INGQAVPALNIWQLSSEQPLSGV 534
               Q   AF+FR+      +PF PV+   R +SLQ  +N    PA+ +W +  E   SG 
Sbjct: 463  ---QMNDAFMFRD------IPFSPVKFAPRNQSLQFKVNDAPQPAMTLWLMEGESCGSGD 513

Query: 535  VYRQQLAAACASEITALLNGGQQGRAGFVRGAEDLQGLLPADIAILVRDGKEAQAVRNEL 594
             Y+  +A  CA++I   L  GQ G A    G +  + +  +DI++LVR  +EA  +R+ L
Sbjct: 514  -YQSYMAQVCATQIRDWLRAGQTGDALLTNG-DSSRPVRASDISVLVRSRREAALIRDAL 571

Query: 595  SVRGVRSVYLSDKDSVFAAQEAHDLLSWLKACAEPDVERPLRAALASITLNLSLTELERL 654
            ++  + SVYLS++DSVF   EA ++L  L+A   P+ E  LR+ALA+  + L+  ++E L
Sbjct: 572  TLLAIPSVYLSNRDSVFETLEAQEMLWVLQAVMAPERENTLRSALATSMMGLTALDIETL 631

Query: 655  NQDELAWEKRVMQFREYRVIWRSQGILPMLRRLLHDFELPQALIARSDGERILTNLLHLS 714
            N DE AW+  V +F  YR IW  +G++PMLR L+    + + L+A + GER LT++LH+S
Sbjct: 632  NNDENAWDAVVEEFDGYRQIWHKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHIS 691

Query: 715  ELLQQAAAELDGEQALIRHLSEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPL 774
            ELLQ+A ++L+ E AL+R L++H+         Q LRLESD+ LV++VTIHKSKGLEYPL
Sbjct: 692  ELLQEAGSQLESEHALVRWLAQHILEPDSNASSQQLRLESDKHLVQIVTIHKSKGLEYPL 751

Query: 775  VFLPFICSAKPVDGSRLPMHYHDANG-QAQITLSPTPELIALADDERLAEDLRLLYVALT 833
            V+LPFI   +  D +     YHD +  +A + LS   E IALA+ ERLAEDLRLLYVALT
Sbjct: 752  VWLPFITHFRVQDQA----FYHDRHSYEAVLDLSHAEESIALAEAERLAEDLRLLYVALT 807

Query: 834  RAQHACWLGVTDLKRGNNN---SSVLHLSALGYLLGGGEKLVESTALKRWLEDLQQNCSA 890
            RA   C LGV  L R  ++    + +H SALG LL  GE + ++  L+  +E L   C  
Sbjct: 808  RAVWHCSLGVAPLVRRRSDKKGETDVHQSALGRLLQKGEPM-DAAGLRACIEAL---CDE 863

Query: 891  LSYGEMPEAT-TERFLPPRNEATLLAPLIPKRKAAENWWIASYSALRIGDSLSAGSDEAP 949
                  P  T  +R+         L+    +R   ++W + SYS L+     S   D  P
Sbjct: 864  DIVCRTPGNTDNDRWQIAAASHAELSARALQRLLYDSWRVTSYSGLQ-QRGHSVAQDLIP 922

Query: 950  ESPQAQKLFDDERLDPDAP---REVLASGGDIHRFPRGPNPGTFLHGLLEWAGDEGFAAD 1006
                        RLD DA        A     H FPRG +PGTFLH L E   D     +
Sbjct: 923  ------------RLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHSLFEEL-DFTQPIN 969

Query: 1007 PKSIENAIARRCNRRGWEGWINTLSDWLQHLLQAPLRIGTEQPPVVFEQLTEYRVEMEFW 1066
            P+ ++  +        WE     L+ WL  +L  PL        V+ E+  E +VEMEF+
Sbjct: 970  PQWVQEKLELSGFETRWE---PVLTRWLDTVLHVPLNETGVSLSVLTER--EKQVEMEFY 1024

Query: 1067 F-ASHKVDVLKLDELVRQYTHAGASRVVAEPVLLNGMFKGFIDLTFEHAGRYYVADYKSN 1125
               +  +   +LD L+R+Y    A     + + + GM KGFIDL F + GRYY+ DYKSN
Sbjct: 1025 LPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLDYKSN 1084

Query: 1126 WLGADDSAYTEQAMEQSMLDHRYDLQYVLYLLALHRQLKARLADYDYDRHMGGALYLFLR 1185
            WLG D +AYT+ AM  +M  HRYDLQY LY LALHR L+ R+ +YDY+RH GG +YLFLR
Sbjct: 1085 WLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMTNYDYERHFGGVIYLFLR 1144

Query: 1186 GT--RAPGQGVYFTRPPRELIERLDRLFQGK 1214
            G     P QG++ TRP   LI +LD +F G+
Sbjct: 1145 GVDGERPQQGIFTTRPAAALINQLDDMFAGE 1175