Pairwise Alignments

Query, 1229 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas fluorescens FW300-N2E3

Subject, 752 a.a., Superfamily I DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 73.6 bits (179), Expect = 6e-17
 Identities = 107/515 (20%), Positives = 200/515 (38%), Gaps = 70/515 (13%)

Query: 331 DAAVLKHAAQWVGARFEEEKRRRAEMGFDDMLLRLDAALRAEGGERLATLIREQFPVALI 390
           D A +K     +   +++   + + M FDD+L   +   R      +    +++F   L+
Sbjct: 166 DEAAMKPRMGEIYRAYQKRLFKSSAMDFDDLLFNTNVLFRDHPD--VLNKYQQRFRYVLV 223

Query: 391 DEFQDTDPVQYWIFESIYRIEDNNPECGLFLIGDPKQAIYAFRGADIYTYLRARQATSGR 450
           DEFQDT+  QY I + +  +  N     + ++GD  Q+IYAFRGADI   L   +     
Sbjct: 224 DEFQDTNLSQYLITKKLAAVHQN-----ICVVGDDAQSIYAFRGADIQNILNFEKDYPD- 277

Query: 451 LHT--LGTNFRSSHGMVDAVNHVFQRAEAREQGRGAFLFREKNGENPVPFLPVESQGRKE 508
           LH   L  N+RS+  +V+A N + ++ +A+ +         +NG   +  L   +   +E
Sbjct: 278 LHVVKLEQNYRSTKNIVEAANSIIEKNKAQLKKN----VWTQNGNGDLIELIKSASDNEE 333

Query: 509 SLQINGQAVPALNIWQLSSEQPLSGVVYRQQLAAACASEITALLNGGQQ--GRAGFVRGA 566
              +        N  +L +      ++YR    +    E    +N   +  G   F +  
Sbjct: 334 GRMVASTIFEEKNNKKLQNSD--FAILYRTNSQSRALEEALRKMNISYKIVGGLSFYQ-R 390

Query: 567 EDLQGLLPADIAILVRDGKEAQAVRNELSVRGVRSVYLSDKDSVFAAQEAHDLLSWLKAC 626
           ++++ L+     ++ +D +EA         RG+    LS  + +  A   HD+  W    
Sbjct: 391 KEIKDLMAYFRYVVNQDDEEAFKRIINYPKRGIG---LSSVEKMMVAAYEHDIPLWQVVT 447

Query: 627 AEPDVERPLRAALASITLNLSLTELERLNQDELAWEKRVMQFREYRVIWRSQGILPMLRR 686
                     ++  S   + S+++   + +      +R   +     I +  G   +LR 
Sbjct: 448 NS--------SSFLSGRASNSVSDFATMIKSFQMEVERKDAYEAASTIAKQSG---LLRE 496

Query: 687 LLHDFELPQALIARSDGERILTNLLHLSELLQQAAAELDGEQALIRHLSEHLALSGQAGE 746
           L  D  +        +G     N+  L   +++     + E   +    + +AL      
Sbjct: 497 LYEDKTI--------EGLNRYENVQELLNAIKEYVDNPENEDKNLGAFLQEIALLTDNDR 548

Query: 747 EQILRLESDEQLVKVVTIHKSKGLEYPLVFLPFICSAKPVDGSRLPMHYHDANGQAQITL 806
           +     + +   V ++TIH SKGLE+  VF+                          +  
Sbjct: 549 D-----KDEMDAVTLMTIHSSKGLEFRQVFV------------------------VGLEE 579

Query: 807 SPTPELIALADDERLAEDLRLLYVALTRAQHACWL 841
              P  + +   E L E+ RL YVA TRA    +L
Sbjct: 580 DLFPSQMMMQSREDLEEERRLFYVATTRAMEKLYL 614



 Score = 34.3 bits (77), Expect = 4e-05
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)

Query: 15 GSQLIEASAGTGKTFTISALYLRLVLGHGDESAGFGRELLPPQILVVTFTDAATKELRER 74
          G  +I A AG+GKT  ++     L+           + + P QIL +TFT+ A  E+R R
Sbjct: 20 GPLMIIAGAGSGKTRVLTFRIAHLIRA---------KNVDPFQILALTFTNKAASEMRNR 70

Query: 75 IRTRLAEAAR 84
          I   +   AR
Sbjct: 71 IERLIGLEAR 80