Pairwise Alignments

Query, 695 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas fluorescens FW300-N2E3

Subject, 611 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  424 bits (1091), Expect = e-123
 Identities = 284/658 (43%), Positives = 376/658 (57%), Gaps = 73/658 (11%)

Query: 38  VERGWLRALDKAFVAFLHELAPDGDPLVLLAAALTSHQLGHGHVCLDLFETLKEPDFALS 97
           VE+  LR +D  F      +A + DP V LAAAL SH  G GHVCL L          L+
Sbjct: 11  VEQKLLRPIDAQFAL---TVAGNDDPAVTLAAALLSHDAGEGHVCLPLSR--------LT 59

Query: 98  LPPEGDLQTGTLLLPSQLLEALEGAHWCKVLASSSLVALAVDERDESQQRPLVLSGKRLY 157
           L  E        LL + + E      W K L +S+ V+            PL+L G+RLY
Sbjct: 60  LTEEAHP-----LLVACISETATPIDWKKRLLASAAVSCG------DSPAPLILCGERLY 108

Query: 158 LRRYWTYER---RIDSALRQRLIVHEPTPDDLSERLSGLFGQASSSAQIDWQKLACALAT 214
           L R W  ER   R  + + Q + V E   D LS  L  LF       +++WQK+A A+A 
Sbjct: 109 LNRMWCNERTVARFFNEVNQAIAVDE---DQLSRILDALFPPTD---EVNWQKVAAAVAL 162

Query: 215 RGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEAGKPLRIRLAAPTGKAAARLTESISQQV 274
               S+++GGPGTGKTTTV +LLA L   A   G+  RIRLAAPTGKAAARLTES+   +
Sbjct: 163 TRRISVISGGPGTGKTTTVAKLLAALIQMA--DGERCRIRLAAPTGKAAARLTESLGAAL 220

Query: 275 RTLQVAESVRDKIPSDVTTVHRLLGSRPGTRHFRHHAGNRLPLDVLVVDEASMIDLEMMA 334
           R L + ++ + +IP D +T+HRLLG++PG++  RHHAGN L LDVLVVDEASMIDL MM+
Sbjct: 221 RQLPLTDAQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMS 280

Query: 335 NLLDALPTHARLVLLGDKDQLASVEAGAVLGDLCRDAEAGWYSPQTRDWLEAVSGENLGS 394
            L+D+LP H R++ LGD+DQLASVEAGAVLGD+C    AG+ + + R             
Sbjct: 281 RLIDSLPPHGRVIFLGDRDQLASVEAGAVLGDICAYVNAGFTAERARQLSRLTGSAIPAG 340

Query: 395 SGLQEDIDATHPLAQQVVMLRHSRRFGEGSGIGQLARWVNQQQADEARKLLAARSHADLF 454
           +G Q        L   + +L+ S RFG  SGIG+LA  +N      A + +  +  +D+ 
Sbjct: 341 AGTQ-----AASLRDSLCLLQKSYRFGSDSGIGKLAAAINCGDR-SAIQAVFQQGFSDIE 394

Query: 455 SLPLKGEQDRALERLLLEGHGEGPQGYRHYLSLLRNQRPSINSLPDDPCWIEWARNVLQA 514
              L+   D A    +L+   E   GY  YL LL  +     + P+          +LQA
Sbjct: 395 KRTLQSSDDYA---GMLD---EALAGYGRYLRLLHEK-----ATPE---------AILQA 434

Query: 515 FDAFQLLCAVRKGPWGVEGLNQRITGALLKARLID--SDQQWYEGRPVLMTRNDYGLGLM 572
           F+ +QLLCA+R+GP+GV GLN RI  A+++ R I      +WYEGRPV++ RND  LGL 
Sbjct: 435 FNEYQLLCALREGPFGVRGLNDRIEQAMVQQRKIQRHPHSRWYEGRPVMIARNDSALGLF 494

Query: 573 NGDIGIALKLPERDGQEGGRQVLRVAFARNDGQGGVRFVLPSRLNDVETVYAMTVHKSQG 632
           NGDIGIAL     D  +G    LRV F   DG   ++ V PSRL + +T +AMTVHKSQG
Sbjct: 495 NGDIGIAL-----DRGQG----LRVWFVMPDGT--IKSVQPSRLPEHDTTWAMTVHKSQG 543

Query: 633 SEFAHTALILPDALNPVLTKELIYTGITRAKNWFSLIEPRTGIFEEAVRRKVKRLSGL 690
           SEF H ALILP   +PV+T+EL+YT +TRA+   SL      I   A+  + +R SGL
Sbjct: 544 SEFDHAALILPSQRSPVVTRELVYTAVTRARRRLSLYADER-ILAGAIVTRTERRSGL 600