Pairwise Alignments

Query, 372 a.a., LPS export ABC transporter permease LptF from Pseudomonas fluorescens FW300-N2E3

Subject, 372 a.a., permease from Pseudomonas simiae WCS417

 Score =  624 bits (1608), Expect = 0.0
 Identities = 313/372 (84%), Positives = 343/372 (92%)

Query: 1   LIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKFLAQAASGALDPGSLFLIMGFRLPGFL 60
           +IVFRYLSREVLLTLSAVSAVLLVIIMSGRF+K+LAQAASGALDPGSLFLIMGFRLPGFL
Sbjct: 1   MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFL 60

Query: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTLFPAALVAVIVAWLSLSL 120
           QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMT+ PAA VA+IVAWLSL L
Sbjct: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALIVAWLSLGL 120

Query: 121 APQGANQFQLLLNKQDAMTEFDTLVPGRFQALRDGSRVTYTEQLSDDRINLGGVFISEKR 180
           APQGA QFQL+LNKQDAMTEFDTL PGRFQAL DGSRVTYTE ++DDR NLGGVFISEKR
Sbjct: 121 APQGAMQFQLVLNKQDAMTEFDTLEPGRFQALNDGSRVTYTETMTDDRANLGGVFISEKR 180

Query: 181 LSADQKDRGISVLVAEKGRQEIKEDGNRYLILDNGYRYDGQPGLADYRAIKYDTYGVLLP 240
           L  D+KDRGISVLVA+ GRQE++ DG+RYLIL+NGYRYDG PG+ADYRAIKYDTYGV+L 
Sbjct: 181 LGQDKKDRGISVLVADSGRQEVRPDGSRYLILENGYRYDGSPGMADYRAIKYDTYGVMLA 240

Query: 241 KPDVSDEVTDRDAMPTRTLLDNPDIRARAELEWRVSLPLLVFIVTLMAVPLSRVNPRQGR 300
           +PD+SDEVTDRDA+PT  L  + ++R+ AEL+WR+SLPLLVFIVTLMAVPLSRVNPRQGR
Sbjct: 241 RPDISDEVTDRDAIPTTELFGSKELRSIAELQWRISLPLLVFIVTLMAVPLSRVNPRQGR 300

Query: 301 FLKLLPAILLYMAYLTILIAARGALEKGKIPPALGLWWVHAIFLAIGLGLLYWEPLRLKM 360
           FLKLLPAILLYMAYLTILI+ARG+LEKGK+ P LGLWWVH IFL IGLGLLYWEP+RLKM
Sbjct: 301 FLKLLPAILLYMAYLTILISARGSLEKGKLSPTLGLWWVHGIFLVIGLGLLYWEPIRLKM 360

Query: 361 ASRRSALEVTRG 372
            SRR   E+ RG
Sbjct: 361 KSRRGQKELARG 372