Pairwise Alignments

Query, 372 a.a., LPS export ABC transporter permease LptF from Pseudomonas fluorescens FW300-N2E3

Subject, 371 a.a., Permease YjgP/YjgQ family protein from Pseudomonas putida KT2440

 Score =  594 bits (1531), Expect = e-174
 Identities = 301/373 (80%), Positives = 338/373 (90%), Gaps = 3/373 (0%)

Query: 1   LIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKFLAQAASGALDPGSLFLIMGFRLPGFL 60
           +IVFRYLSREVL+TLSAVSAVLLVIIMSGRFIK+LAQAA G LDPG LFLIMGFRLPGFL
Sbjct: 1   MIVFRYLSREVLVTLSAVSAVLLVIIMSGRFIKYLAQAAQGVLDPGVLFLIMGFRLPGFL 60

Query: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTLFPAALVAVIVAWLSLSL 120
           QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMT+ PAALVA++VAWLSLSL
Sbjct: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMAPAALVALLVAWLSLSL 120

Query: 121 APQGANQFQLLLNKQDAMTEFDTLVPGRFQALRDGSRVTYTEQLSDDRINLGGVFISEKR 180
           AP G  Q Q ++++QDA+TEFDTLVPGRFQ LRDGSRVTYTEQLSDDRINLGGVFISEKR
Sbjct: 121 APLGVAQVQQIISQQDALTEFDTLVPGRFQTLRDGSRVTYTEQLSDDRINLGGVFISEKR 180

Query: 181 LSADQ-KDRGISVLVAEKGRQEIKEDGNRYLILDNGYRYDGQPGLADYRAIKYDTYGVLL 239
            + D+ KDR  SVLVAEKG QEI+ DGNRYL+L+NGYRYDG PG ADYRAIKYDTYGVLL
Sbjct: 181 FNQDKTKDRAPSVLVAEKGHQEIQADGNRYLVLENGYRYDGNPGQADYRAIKYDTYGVLL 240

Query: 240 PKPDVSDEVTDRDAMPTRTLLDNPDIRARAELEWRVSLPLLVFIVTLMAVPLSRVNPRQG 299
           PKP+V++EVT+R+A+PT  L+    +R RAEL+WR+SLP+LVF+VTL+AVPLSRVNPRQG
Sbjct: 241 PKPEVAEEVTEREALPTSELIGKEGLRERAELQWRLSLPILVFVVTLLAVPLSRVNPRQG 300

Query: 300 RFLKLLPAILLYMAYLTILIAARGALEKGKIPPALGLWWVHAIFLAIGLGLLYWEPLRLK 359
           RFLKLLPAILLYMAYLT+LI+ RGALEKGK+P ALG+WWVH +FL IGLGL+YWEPLRLK
Sbjct: 301 RFLKLLPAILLYMAYLTMLISVRGALEKGKLPIALGMWWVHGLFLLIGLGLMYWEPLRLK 360

Query: 360 MASRRSALEVTRG 372
            A+RR+  EV  G
Sbjct: 361 RAARRA--EVAHG 371