Pairwise Alignments

Query, 353 a.a., LPS export ABC transporter permease LptG from Pseudomonas fluorescens FW300-N2E3

Subject, 359 a.a., permease from Pseudomonas simiae WCS417

 Score =  577 bits (1487), Expect = e-169
 Identities = 285/359 (79%), Positives = 316/359 (88%), Gaps = 6/359 (1%)

Query: 1   VVKLDRYIGGSVFMAILAVLGIILGLATLFAFIDEMSDVTDTYTLTDVLSYVALTAPRRV 60
           + KLDRYIG SV +AILAVLGIILGLA+LFAFIDE+ +VTDTYT+ DVLSYV LTAPRR+
Sbjct: 1   MAKLDRYIGSSVLIAILAVLGIILGLASLFAFIDEVGNVTDTYTVWDVLSYVGLTAPRRL 60

Query: 61  YDMLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGVLVGEYV 120
           YDM+PMAALIGCLIGLGSLAS+SELTIMRAAGVSIGRIVWAVMKPML+LM   VL+GEYV
Sbjct: 61  YDMMPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLLLMACSVLIGEYV 120

Query: 121 APAAENVAQANRSLAQGIGDAQSAKHGMWHRQGDEFIHINSVQPDGILYGVTRYRFDRER 180
           AP AE  AQANR+LAQG GDAQSAKHG+WHRQGDEFIHIN+VQP G+L GVTRY FD+ER
Sbjct: 121 APPAETTAQANRALAQGSGDAQSAKHGLWHRQGDEFIHINAVQPGGLLIGVTRYTFDKER 180

Query: 181 HMLTSSFSKRAQFETDHWQLNDVTTTVFHD------GSTEVVTAPQERWEVPLSPQLLNT 234
           H+L SSF+KRAQ+  + WQL+DVTTT F +       STEV+  P + W++ L P+LLNT
Sbjct: 181 HLLESSFAKRAQYSGEKWQLSDVTTTYFRNVGQGTKASTEVINVPSQEWDIALKPELLNT 240

Query: 235 VIMAPESLSISGLWGYIHYLADQGLNNGRYWLAFWVKVLQPLVTVALVLMAISFIFGPLR 294
           V+M PESL ISGLWGYIHYL DQGLNNGRYWLAFWVKVLQP+VT ALVLMAISFIFGPLR
Sbjct: 241 VVMIPESLPISGLWGYIHYLKDQGLNNGRYWLAFWVKVLQPVVTAALVLMAISFIFGPLR 300

Query: 295 SVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICGVAGLWMLRRAG 353
           SVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVP  IC +AG W+LRRAG
Sbjct: 301 SVTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPTAICALAGFWLLRRAG 359