Pairwise Alignments

Query, 353 a.a., LPS export ABC transporter permease LptG from Pseudomonas fluorescens FW300-N2E3

Subject, 360 a.a., lipopolysaccharide export ABC permease from Escherichia coli BL21

 Score =  241 bits (616), Expect = 2e-68
 Identities = 129/354 (36%), Positives = 205/354 (57%), Gaps = 8/354 (2%)

Query: 4   LDRYIGGSVFMAILAVLGIILGLATLFAFIDEMSDVTD-TYTLTDVLSYVALTAPRRVYD 62
           LDRYIG ++F  I+  L +++ L+ +  F+D++      +Y       Y  L+ P+ V  
Sbjct: 7   LDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQI 66

Query: 63  MLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGVLVGEYVAP 122
             PMAAL+G L+GLG LA  SEL +M+A+G +  ++  +VMK  + L+L  + +GE+VAP
Sbjct: 67  FFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAP 126

Query: 123 AAENVAQANRSLAQGIGDAQSAKHGMWHRQGDEFIHINSVQPDGILYGVTRYRFDRERHM 182
             E +A+  R+ A   G   S + G+W + G+ F++I  V+ D  L G++ Y F+  R +
Sbjct: 127 QGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRL 186

Query: 183 LTSSFSKRAQFETDH--WQLNDVTTTVFHDGSTEVVTAPQE---RWEVPLSPQLLNTVIM 237
            +  ++  A+F+ +H  W+L+ V  +   +   + +T  Q     W+  L+P  L  V +
Sbjct: 187 QSVRYAATAKFDPEHKVWRLSQVDESDLTN--PKQITGSQTVSGTWKTNLTPDKLGVVAL 244

Query: 238 APESLSISGLWGYIHYLADQGLNNGRYWLAFWVKVLQPLVTVALVLMAISFIFGPLRSVT 297
            P++LSISGL  Y+ YL   G + GRY L  W K+ QPL    ++LMA+SFIFGPLRSV 
Sbjct: 245 DPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVP 304

Query: 298 LGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICGVAGLWMLRR 351
           +G RV TG+  GF F +   + GP +LV+G  P+   L+P+    +  LW+L R
Sbjct: 305 MGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMR 358