Pairwise Alignments

Query, 353 a.a., LPS export ABC transporter permease LptG from Pseudomonas fluorescens FW300-N2E3

Subject, 386 a.a., hypothetical protein from Escherichia coli BL21

 Score =  160 bits (405), Expect = 5e-44
 Identities = 108/350 (30%), Positives = 179/350 (51%), Gaps = 18/350 (5%)

Query: 6   RYIGGSVFMAILAVLGIILGLATLFAFIDEMSDVTDT-YTLTDVLSYVALTAPRRVYDML 64
           RY+   +F+   A  G++L L T F  I+E+ DV+   Y  T  +  V +T PR + ++ 
Sbjct: 33  RYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRTLVELS 92

Query: 65  PMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGVL-------VG 117
           P  AL+G ++GLG L+ +SELT +R+ G SI RI        LV ++AG+L       + 
Sbjct: 93  PFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIA-------LVALVAGILWTVSLGAID 145

Query: 118 EYVAPAAENVAQANRSLAQGIGDAQSAKHGM-WHRQGDEFIHINSVQPDGILYGVTRYRF 176
           E+VA   +  A   +S A  +G+       M W R+G+EF+ + S+   G   GV  + +
Sbjct: 146 EWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHY 205

Query: 177 DRERHMLTSSFSKRAQFETDH-WQLNDVTTTVFHDGSTEVVTAPQERWEVPLSPQLLNTV 235
             +  + +  +++ A  E D  W L+ V    + +G   + T     W+   +   L  +
Sbjct: 206 RDDLSLESYIYARSATIEDDKTWILHGVNHKKWLNGKETLETLDNLAWQSAFTSMDLEEL 265

Query: 236 IMAPESLSISGLWGYIHYLADQGLNNGRYWLAFWVKVLQPLVTVALVLMAISFIFGPLRS 295
            M   + S+  L  YIHYL + G  +  Y LA W K+ QP++T+A++L+A+ F F   RS
Sbjct: 266 SMPGNTFSVRQLNHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRS 325

Query: 296 VTLGQRVFTGVLVGFTFRIAQDLLGPSSLVFGFS-PLFAVLVPAGICGVA 344
             +G R+  GV+VG    I+  ++    L+F  S P+ A+ +P     VA
Sbjct: 326 PGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPIAFVLVA 375