Pairwise Alignments

Query, 571 a.a., N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data) from Pseudomonas fluorescens FW300-N2E3

Subject, 477 a.a., PTS glucose transporter subunit IIBC from Serratia liquefaciens MT49

 Score =  359 bits (921), Expect = e-103
 Identities = 199/476 (41%), Positives = 291/476 (61%), Gaps = 26/476 (5%)

Query: 1   MYQLFIEGLQRLGRALMLPIAILPIAGLLLRLGDTDL--LNIAIIH---DAGQVIFANLA 55
           M++     LQ++G++LMLP+++LPIAG+LL +G  +   L   + H   +AG  +FAN+ 
Sbjct: 1   MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP 60

Query: 56  LIFAIGIAVGFARDNNGTAGLAGAIGYLVMVSTLKVLDASI--------------NMGML 101
           LIFAIG+A+GF  +N+G + LA  + Y +MV T+ V+   +              + G+L
Sbjct: 61  LIFAIGVALGFT-NNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIAAKHLADTGVL 119

Query: 102 AGIISGLMAGALYNRFKDIKLPEYLAFFGGRRFVPIATGFSAVGLGVIFGLIWPPIQHGI 161
            GIISG +A  ++NRF  I+LPEYL FF G+RFVPI +G +A+ LGV+   IWPPI   I
Sbjct: 120 GGIISGSIAAYMFNRFFRIQLPEYLGFFAGKRFVPIISGLAAIVLGVVLSFIWPPIGTAI 179

Query: 162 NSFGQLLLESGSIGAF-VFGVFNRLLIVTGLHHILNNMAWFIFGSFTDPTTGAIVTGDLA 220
            +F Q       + AF ++GV  R L+  GLHHI N       G +T+   G +  GD+ 
Sbjct: 180 QTFSQWAAYQNPVVAFGIYGVVERALVPFGLHHIWNVPFQMQIGEYTN-AAGQVFHGDIP 238

Query: 221 RYFAGDPKGGQFMTGMFPMMIFGLPAACLAMYRNALPERRKVMGGIFLSMALTSFLTGVT 280
           RY AGDP  G+ ++G F   ++GLPAA +A++ +A PE R  +GGI +S ALTSFLTG+T
Sbjct: 239 RYMAGDPTAGK-LSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGIT 297

Query: 281 EPIEFAFMFLAPLLYLLHVLLTGMAMAITNALNIHLGFTFSGGAIDMALGWGKSTNGWLV 340
           EPIEF+FMF+AP+LY +H +L G+A  I   L +  G +FS G ID  +  G S+  WL 
Sbjct: 298 EPIEFSFMFVAPILYAIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKIWLF 357

Query: 341 FPVGLAYAVIYYVVFDFCIRRFNLKTPGREGVVVGEKVVLSENQRAGAYIQALGGAENLI 400
             VG+ Y ++YY +F   I + +LKTPGRE     E+V    ++ + A +QA GG EN+ 
Sbjct: 358 PVVGIIYGLVYYTIFRVLIAKLDLKTPGRED-TASEQVAQGGSEMSAALVQAFGGKENIT 416

Query: 401 TVGACTTRLRLEMVDRNKASDSELKALGAMAVVRPGKGGSLQVVVGPLADSIADEI 456
            + AC TRLR+ + D +K   + LK LGA  VV  G G  +Q + G  +D++  ++
Sbjct: 417 NLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSG--VQAIFGTKSDNLKTDM 470



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 492 LNAVGGSDNVLQLDCVAMTRIRLQLADGKALSECQLKDLGCQGVSALDGGVWHLLIGDKA 551
           + A GG +N+  LD   +TR+R+ +AD   + +  LK LG  GV     GV   + G K+
Sbjct: 406 VQAFGGKENITNLDA-CITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGV-QAIFGTKS 463

Query: 552 LSLSEALE 559
            +L   ++
Sbjct: 464 DNLKTDMD 471