Pairwise Alignments

Query, 571 a.a., N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data) from Pseudomonas fluorescens FW300-N2E3

Subject, 477 a.a., fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) from Escherichia coli BW25113

 Score =  358 bits (920), Expect = e-103
 Identities = 199/476 (41%), Positives = 288/476 (60%), Gaps = 26/476 (5%)

Query: 1   MYQLFIEGLQRLGRALMLPIAILPIAGLLLRLGDTDL--LNIAIIH---DAGQVIFANLA 55
           M++     LQ++G++LMLP+++LPIAG+LL +G  +   L   + H   +AG  +FAN+ 
Sbjct: 1   MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP 60

Query: 56  LIFAIGIAVGFARDNNGTAGLAGAIGYLVMVSTLKVLDASI--------------NMGML 101
           LIFAIG+A+GF  +N+G + LA  + Y +MV T+ V+   +              + G+L
Sbjct: 61  LIFAIGVALGFT-NNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVL 119

Query: 102 AGIISGLMAGALYNRFKDIKLPEYLAFFGGRRFVPIATGFSAVGLGVIFGLIWPPIQHGI 161
            GIISG +A  ++NRF  IKLPEYL FF G+RFVPI +G +A+  GV+   IWPPI   I
Sbjct: 120 GGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAI 179

Query: 162 NSFGQLLLESGSIGAF-VFGVFNRLLIVTGLHHILNNMAWFIFGSFTDPTTGAIVTGDLA 220
            +F Q       + AF ++G   R L+  GLHHI N       G +T+   G +  GD+ 
Sbjct: 180 QTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTN-AAGQVFHGDIP 238

Query: 221 RYFAGDPKGGQFMTGMFPMMIFGLPAACLAMYRNALPERRKVMGGIFLSMALTSFLTGVT 280
           RY AGDP  G+ ++G F   ++GLPAA +A++ +A PE R  +GGI +S ALTSFLTG+T
Sbjct: 239 RYMAGDPTAGK-LSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGIT 297

Query: 281 EPIEFAFMFLAPLLYLLHVLLTGMAMAITNALNIHLGFTFSGGAIDMALGWGKSTNGWLV 340
           EPIEF+FMF+AP+LY++H +L G+A  I   L +  G +FS G ID  +  G S+  WL 
Sbjct: 298 EPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLF 357

Query: 341 FPVGLAYAVIYYVVFDFCIRRFNLKTPGREGVVVGEKVVLSENQRAGAYIQALGGAENLI 400
             VG+ YA++YY +F   I+  +LKTPGRE      K     ++ A A + A GG EN+ 
Sbjct: 358 PIVGIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKAT-GTSEMAPALVAAFGGKENIT 416

Query: 401 TVGACTTRLRLEMVDRNKASDSELKALGAMAVVRPGKGGSLQVVVGPLADSIADEI 456
            + AC TRLR+ + D +K   + LK LGA  VV  G G  +Q + G  +D++  E+
Sbjct: 417 NLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSG--VQAIFGTKSDNLKTEM 470



 Score = 38.1 bits (87), Expect = 8e-07
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 474 TEEAPKAAPVETPEAQKWLNAVGGSDNVLQLDCVAMTRIRLQLADGKALSECQLKDLGCQ 533
           TE+A      E   A   + A GG +N+  LD   +TR+R+ +AD   + +  LK LG  
Sbjct: 390 TEDAKATGTSEMAPAL--VAAFGGKENITNLDA-CITRLRVSVADVSKVDQAGLKKLGAA 446

Query: 534 GVSALDGGVWHLLIGDKALSLSEALE 559
           GV     GV   + G K+ +L   ++
Sbjct: 447 GVVVAGSGV-QAIFGTKSDNLKTEMD 471