Pairwise Alignments

Query, 571 a.a., N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data) from Pseudomonas fluorescens FW300-N2E3

Subject, 477 a.a., PTS glucose transporter subunit IIBC from Erwinia amylovora T8

 Score =  350 bits (899), Expect = e-101
 Identities = 194/476 (40%), Positives = 287/476 (60%), Gaps = 26/476 (5%)

Query: 1   MYQLFIEGLQRLGRALMLPIAILPIAGLLLRLGDTDLLNIA-----IIHDAGQVIFANLA 55
           M++     LQ++G++LMLP+++LPIAG+LL +G  +   +      ++ +AG  +F N+ 
Sbjct: 1   MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSQVMAEAGGSVFTNMP 60

Query: 56  LIFAIGIAVGFARDNNGTAGLAGAIGYLVMVSTLKVLDASI--------------NMGML 101
           LIFAIG+A+GF  +N+G + LA  + Y +MV T+ V+   +              + G+L
Sbjct: 61  LIFAIGVALGFT-NNDGVSALAAVVAYGIMVKTMAVVAPLVLHMPAAEIAAKHLADTGVL 119

Query: 102 AGIISGLMAGALYNRFKDIKLPEYLAFFGGRRFVPIATGFSAVGLGVIFGLIWPPIQHGI 161
            GII+G +A  ++NRF  I LPEYL FF G+RFVPI +G +A+ LGV+   IWPP+   I
Sbjct: 120 GGIIAGSIAAYMFNRFYRITLPEYLGFFAGKRFVPIISGMTAIFLGVVLSFIWPPVGTAI 179

Query: 162 NSFGQLLLESGSIGAF-VFGVFNRLLIVTGLHHILNNMAWFIFGSFTDPTTGAIVTGDLA 220
            +F Q       + AF ++G+  R L+  GLHHI N       G +T+   G +  GD+ 
Sbjct: 180 QTFSQWAAYQNPVVAFGIYGLVERSLVPFGLHHIWNVPFQMQIGEYTN-AAGQVFHGDIP 238

Query: 221 RYFAGDPKGGQFMTGMFPMMIFGLPAACLAMYRNALPERRKVMGGIFLSMALTSFLTGVT 280
           RY AGDP  G+ ++G F   ++GLPAA +A++ +A PE R  +GGI +S ALTSFLTG+T
Sbjct: 239 RYMAGDPTAGK-LSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGIT 297

Query: 281 EPIEFAFMFLAPLLYLLHVLLTGMAMAITNALNIHLGFTFSGGAIDMALGWGKSTNGWLV 340
           EPIEF+FMF+AP+LY +H +L G+A  I   L +  G +FS G ID  +  G S+  WL 
Sbjct: 298 EPIEFSFMFVAPILYAIHAILAGLAFPICILLGMRDGTSFSHGLIDFVVLSGNSSKIWLF 357

Query: 341 FPVGLAYAVIYYVVFDFCIRRFNLKTPGREGVVVGEKVVLSENQRAGAYIQALGGAENLI 400
             VG+ Y V+YY +F   I + NLKTPGRE     E+ V S +  A + + A GG +N+ 
Sbjct: 358 PLVGIIYGVVYYTIFRVLIAKLNLKTPGRE-ESTNEQAVGSASDMAASLVVAFGGKDNIT 416

Query: 401 TVGACTTRLRLEMVDRNKASDSELKALGAMAVVRPGKGGSLQVVVGPLADSIADEI 456
            + AC TRLR+ + D  K   + LK LGA  VV  G G  +Q + G  +D++  ++
Sbjct: 417 NLDACITRLRVSVADVAKVDQAGLKQLGAAGVVVAGSG--VQAIFGTKSDNLKTDM 470



 Score = 39.3 bits (90), Expect = 4e-07
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 494 AVGGSDNVLQLDCVAMTRIRLQLADGKALSECQLKDLGCQGVSALDGGVWHLLIGDKALS 553
           A GG DN+  LD   +TR+R+ +AD   + +  LK LG  GV     GV   + G K+ +
Sbjct: 408 AFGGKDNITNLDA-CITRLRVSVADVAKVDQAGLKQLGAAGVVVAGSGV-QAIFGTKSDN 465

Query: 554 LSEALEGLV 562
           L   ++  +
Sbjct: 466 LKTDMDDYI 474