Pairwise Alignments

Query, 838 a.a., N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) from Pseudomonas fluorescens FW300-N2E3

Subject, 837 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score = 1222 bits (3162), Expect = 0.0
 Identities = 636/837 (75%), Positives = 701/837 (83%), Gaps = 1/837 (0%)

Query: 1   MHNNNKDLTLSAPLSGPVLTLAKVPDPVFASGAMGDGIAIDPLNNTLHAPCAGVVVHVAR 60
           M NNNK+L LSAPLSGPVLTLA VPD VFASG MGDGIAIDPLN+TLHAPC G V+HVAR
Sbjct: 1   MPNNNKELILSAPLSGPVLTLANVPDAVFASGVMGDGIAIDPLNDTLHAPCDGEVIHVAR 60

Query: 61  TGHAVTLRADNGAELLLHLGLDTVELQGEGFSMLVKEGTRVSNGQALLRFDLDQVAQGCK 120
           +GHAVTLR DNG ELLLHLGLDTVELQG+GFSMLVKEG RVS+GQ LLR+DLD+VAQ CK
Sbjct: 61  SGHAVTLRTDNGVELLLHLGLDTVELQGDGFSMLVKEGARVSHGQPLLRYDLDKVAQRCK 120

Query: 121 SLVSLLVLTNSEDFQVLPITLKSVKVGEPLLHIVPRTTHSAQVEADSSGAEVHGHIRIIH 180
           SLVSL+V+TN + FQ  PITLK VKVGEPLL+IV +    A+V+  S+  +V+G +RI H
Sbjct: 121 SLVSLMVVTNGDRFQARPITLKGVKVGEPLLNIVAKAPREAEVDDPSTALQVYGEVRIAH 180

Query: 181 RGGLHARPAALIRQTAHLFNSKSQLHFAGKSASCDSLIGLMGLGIGEQDEVQVSCKGADA 240
           RGGLHARPAALIRQTA  F S+S LHF GKSASCDS++GLMGL + EQ +V+VSC+G+DA
Sbjct: 181 RGGLHARPAALIRQTAQGFKSRSHLHFGGKSASCDSVMGLMGLAVTEQAQVRVSCRGSDA 240

Query: 241 KAALQALLNALSTAVNDDSHAAAPTPIAQRTRTAEAGVLNGVCAAPGLVGGPLFQLAAIP 300
           +AALQALL  LSTA  +D HAAAP  +  + R AE GVL+GVCAAPGLV GPL QL AI 
Sbjct: 241 EAALQALLLTLSTAPAEDDHAAAPV-VRPQVRPAEDGVLHGVCAAPGLVAGPLVQLGAIE 299

Query: 301 LPEDTGKHNAEEQLQALDRALEQVRSEIRETLSHAKKHKHTEEEQIFAAHLALLEDPALL 360
           LP D G H+ + Q + L+ AL+ V  EI+ TL  A+  ++ +EE IF AHLALLEDP LL
Sbjct: 300 LPPDLGGHDVQAQRRHLEAALKHVSDEIQHTLQQARARRNRDEEAIFGAHLALLEDPVLL 359

Query: 361 EAAIQSIDQGSAATHAWSQSIEAQCEVLQQLGNPLLAERANDLRDLRQRVLRALLGQDWH 420
           +AA Q+IDQGSAA HAWSQSI+ QC+VLQQ G+ LLAERANDLRDLRQRVLRALLG+ W 
Sbjct: 360 DAAYQAIDQGSAAPHAWSQSIDVQCQVLQQSGSTLLAERANDLRDLRQRVLRALLGEAWQ 419

Query: 421 YDVPAGAIVAAHELTPSDLLQLSQQGVAGLCMAEGGATSHVAILARGKGLPCLVALSASL 480
            +  AGAIVAA ELTPSDLL LS QGVAG+CM EGGATSHVAILARGKGLPCLVAL  +L
Sbjct: 420 LEAAAGAIVAAQELTPSDLLALSAQGVAGVCMVEGGATSHVAILARGKGLPCLVALGDAL 479

Query: 481 LQQPQGQSVVLDADGGRLELTPDSQRLEQVAQAQREHLQRRERQQAQAHTPAHTRDGLRI 540
           L Q QGQ+VVLDAD GRLELTP ++RL QV QAQ     RR  QQA AH PA T DG+ +
Sbjct: 480 LTQEQGQAVVLDADNGRLELTPSAERLAQVQQAQARQATRRGEQQALAHLPAQTIDGMHV 539

Query: 541 EVAANVASSNEAADALKGGADGVGLLRTEFLFVDRQTAPDEQEQRQAYQAVLDAMGDKSV 600
           EVAANVASS EAA AL  GADGVGLLRTEFLFVDR TAPDE+EQRQAYQAVL AMGDK V
Sbjct: 540 EVAANVASSAEAALALANGADGVGLLRTEFLFVDRHTAPDEEEQRQAYQAVLQAMGDKPV 599

Query: 601 IIRTIDVGGDKQLDYLPLPAEANPVLGLRGIRMAQVRPELLDQQLRALLQVSPLQRCRIL 660
           IIRTIDVGGDKQLDYLPLP EANPVLGLRGIR+AQVRP+LLD QLRALLQ  PL+RCRIL
Sbjct: 600 IIRTIDVGGDKQLDYLPLPFEANPVLGLRGIRLAQVRPQLLDLQLRALLQTRPLERCRIL 659

Query: 661 LPMVTEVDELLYIRQRLDALCAELALTQRLELGVMIEVPAAALLAEQLAEHADFLSIGTN 720
           LPMVTEVDELL+IRQRLDAL AEL L +R +LGVMIEVPAAALLAEQLAEHADFLSIGTN
Sbjct: 660 LPMVTEVDELLHIRQRLDALGAELGLEERPQLGVMIEVPAAALLAEQLAEHADFLSIGTN 719

Query: 721 DLSQYTLAMDRDHAGLAARVDALHPALLRLIAQTCIGAAKHQRWVGVCGALASDPLATPV 780
           DLSQYTLAMDRDHAGLAARVDALHPALLRLIAQTC GAAKH RWVGVCGALASDPLATPV
Sbjct: 720 DLSQYTLAMDRDHAGLAARVDALHPALLRLIAQTCAGAAKHGRWVGVCGALASDPLATPV 779

Query: 781 LIGLGISELSVSPPQVGEIKERVRQLDAADCRRFSATLLNLSSATAVRHACHQHWPL 837
           LIGLG+ ELSVSPPQ+GEIKERVR LDA  C   S  LLNL SA AVR AC QHWPL
Sbjct: 780 LIGLGVRELSVSPPQIGEIKERVRHLDATQCACLSTELLNLGSAQAVRRACLQHWPL 836