Pairwise Alignments

Query, 278 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 278 a.a., Small-conductance mechanosensitive channel from Pseudomonas sp. S08-1

 Score =  357 bits (915), Expect = e-103
 Identities = 174/268 (64%), Positives = 219/268 (81%)

Query: 8   DNLVKASQAWIPMIMEYGSRVLLAAITLAIGWWLINKLTHKVGKLLALRNADLALQGFMS 67
           D LV+ SQAW+P+++EY  ++ LA +TL +GWWLIN++T ++  L+  R  D AL GF+ 
Sbjct: 6   DELVRLSQAWLPVVLEYSGKLTLALVTLVLGWWLINRVTGRLQLLMEGRKVDRALTGFIG 65

Query: 68  SLANIILKVLLMVSVASMIGVETTSFVAAIGAAGLAIGLALQGSLANFAGGVLILLFRPF 127
           SLANI+LKVLLMVSVA+MIG+ T SF+AAIGAAGLAIGLALQGSLANFAGGVLILLFRPF
Sbjct: 66  SLANILLKVLLMVSVATMIGISTASFIAAIGAAGLAIGLALQGSLANFAGGVLILLFRPF 125

Query: 128 RIGDVIEAQGITGTVDSIQIFHTLLRTGDNKTVIVPNGNLSNGIITNHNRQQTRKVVFDI 187
           RIGD IEAQG +GTVDSIQIFHT+LRTGDN+TVI+PNG LSNG I N +RQ TR++VFD+
Sbjct: 126 RIGDWIEAQGQSGTVDSIQIFHTVLRTGDNRTVILPNGALSNGAIVNTSRQATRQIVFDV 185

Query: 188 AVNYDADLQKAREVLLELAKDERVLADPAPVAVVSTLGDSSITVSLRVWVKTADYWDVMF 247
            V+YD+DLQ+A++VL E+A+D RVL DPAP  VV+ LG+++IT+SLRVW   +DYW V F
Sbjct: 186 KVDYDSDLQQAQQVLREMAQDPRVLKDPAPAVVVAGLGETAITLSLRVWTANSDYWPVTF 245

Query: 248 MFNEHARDRLKAAGIDIPYPQRMIRMVQ 275
            FNE  RDRL+  G+DI  P  + R ++
Sbjct: 246 RFNEEIRDRLRQVGVDIAVPGLLARTIK 273