Pairwise Alignments

Query, 278 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 289 a.a., small-conductance mechanosensitive channel MscS from Serratia liquefaciens MT49

 Score =  194 bits (492), Expect = 2e-54
 Identities = 97/262 (37%), Positives = 161/262 (61%), Gaps = 3/262 (1%)

Query: 20  MIMEYGSRVLLAAITLAIGWWLINKLTHKVGKLLALRNADLALQGFMSSLANIILKVLLM 79
           ++++Y   ++ A +   IG  +   +++ + +++ LR  D  +  F+S++A   +     
Sbjct: 23  LLIQYAVNIVAAIVIFIIGSIIARVVSNALSRVMKLRGIDATVADFLSAMARYGILAFTF 82

Query: 80  VSVASMIGVETTSFVAAIGAAGLAIGLALQGSLANFAGGVLILLFRPFRIGDVIEAQGIT 139
           ++V   +GV+TTS +A +GAAGLA+GLALQGSL+NFA GVL++ FRP R G+ ++  G+ 
Sbjct: 83  IAVLGRVGVQTTSVIAVLGAAGLAVGLALQGSLSNFAAGVLLVAFRPLRAGEYVDLGGVA 142

Query: 140 GTVDSIQIFHTLLRTGDNKTVIVPNGNLSNGIITNHNRQQTRKVVFDIAVNYDADLQKAR 199
           GTVD +QIF T LRT DNKT++VPNG +  G I N++R+  R+V   + V Y+AD+   +
Sbjct: 143 GTVDQVQIFSTTLRTADNKTIVVPNGKIIAGNIINYSREPNRRVDIVVGVAYNADIDVVK 202

Query: 200 EVLLE-LAKDERVLADPAPVAVVSTLGDSSITVSLRVWVKTADYWDVMFMFNEHARDRLK 258
           +VL + +A D+R++        ++ +  SS+    R W   A+YW+V F   E+ +  L 
Sbjct: 203 KVLGDVIAADKRIMHAKGVTVRLNEMAPSSLNFVTRSWTTNAEYWNVYFDLMENFKRALD 262

Query: 259 AAGIDIPYPQRMIRM--VQETA 278
           A  I IP+PQ  + +   +ETA
Sbjct: 263 ANNIGIPFPQMDVHLYRTEETA 284