Pairwise Alignments

Query, 278 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 286 a.a., small-conductance mechanosensitive channel MscS from Escherichia coli ECRC102

 Score =  186 bits (472), Expect = 5e-52
 Identities = 99/276 (35%), Positives = 162/276 (58%), Gaps = 15/276 (5%)

Query: 2   DINAEVDNLVKASQAWI----PMIMEYGSRVLLAAITLAIGWWLINKLTHKVGKLLALRN 57
           D+N  VD+ +  + +W+     +++ Y   ++ A   + +G  +   +++ V +L+  R 
Sbjct: 3   DLNV-VDS-INGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRK 60

Query: 58  ADLALQGFMSSLANIILKVLLMVSVASMIGVETTSFVAAIGAAGLAIGLALQGSLANFAG 117
            D  +  F+S+L    +    +++    +GV+T S +A +GAAGLA+GLALQGSL+N A 
Sbjct: 61  IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAA 120

Query: 118 GVLILLFRPFRIGDVIEAQGITGTVDSIQIFHTLLRTGDNKTVIVPNGNLSNGIITNHNR 177
           GVL+++FRPFR G+ ++  G+ GTV S+QIF T +RT D K +++PNG +  G I N +R
Sbjct: 121 GVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSR 180

Query: 178 QQTRKVVFDIAVNYDADLQKAREVLLELAKDE-RVLADPAPVAVVSTLGDSSITVSLRVW 236
           +  R+  F I V YD+D+ + +++L  + + E R+L D      ++ LG SSI   +RVW
Sbjct: 181 EPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVW 240

Query: 237 VKTAD----YWDVMFMFNEHARDRLKAAGIDIPYPQ 268
             + D    YWDV+    E  +    AAGI  PYPQ
Sbjct: 241 SNSGDLQNVYWDVL----ERIKREFDAAGISFPYPQ 272