Pairwise Alignments

Query, 172 a.a., RNA polymerase subunit sigma-24 from Pseudomonas fluorescens FW300-N2E3

Subject, 173 a.a., RNA polymerase sigma70 from Pseudomonas simiae WCS417

 Score = 84.0 bits (206), Expect = 1e-21
 Identities = 50/152 (32%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 9   VFLAQRVSLLRTLERMVNNHSTAEDLLQETYLRVTRALSERAIDHLEPFVFQTARNLALD 68
           +FL    +L   L R V +   A DL+QE++LR+    +   ID+ + ++++TA NL +D
Sbjct: 9   LFLKHADTLRGYLARKVRDPQLAADLVQESFLRLAEKPAGERIDNSQGYLYRTASNLLID 68

Query: 69  HLRARRIQSRTMLEDVPLDVVQNIAAPLSSAEDAAHAEQLLERLNISLSQLTPRQQQIFI 128
           H+R    ++R   + VP + +  I   ++  E  A A+Q  + L  +L++L  R QQIF 
Sbjct: 69  HIRQ---EARRKTDAVPHEALAEIEDEVAGLEAQAMAQQQRQALKQALAELPERTQQIFR 125

Query: 129 LSRLHGHSYLEIAEQLSVSLSTVQKDLKLIMA 160
           L+R+ G ++ ++A  L +S S+VQK L   +A
Sbjct: 126 LNRIEGMTHAQVARHLDISDSSVQKHLAKALA 157