Pairwise Alignments

Query, 172 a.a., RNA polymerase subunit sigma-24 from Pseudomonas fluorescens FW300-N2E3

Subject, 185 a.a., FIG006045: Sigma factor, ECF subfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 64.7 bits (156), Expect = 8e-16
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 17  LLRTLERMVNNHSTAEDLLQETYLRV-TRALSERAIDHLEPFVFQTARNLALDHLRARRI 75
           LL    R V +   A+DL+Q T+ R+  R  S   +++    +F+ ARNL +D  R R +
Sbjct: 25  LLGFFMREVKDPHEAQDLVQLTFERMLARMRSGEPVENARALLFEIARNLLID--RHRHL 82

Query: 76  QSRTMLEDVPLDVVQNIAAPLSSAEDAAHAE-QLLERLNISLSQLTPRQQQIFILSRLHG 134
           + R    D   D++Q +A P +   +A +A  Q    L  ++ +L PR +  F+L ++ G
Sbjct: 83  KVRQHDSD---DLLQEMAGPSAHEPEAIYAGMQRARTLVATIERLPPRCRMAFVLHKIEG 139

Query: 135 HSYLEIAEQLSVSLSTVQKDLKLIMAIC 162
            S+ E+A  + VS++ V++ + L +A C
Sbjct: 140 LSHAEVAAAMGVSVNAVERHIMLAVAAC 167