Pairwise Alignments

Query, 448 a.a., porin from Pseudomonas fluorescens FW300-N2E3

Subject, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  215 bits (547), Expect = 2e-60
 Identities = 148/449 (32%), Positives = 216/449 (48%), Gaps = 44/449 (9%)

Query: 12  QLSAVAVLTMAGNVHAADAFSADSKWMTGDWGGERTKLIDQGIDIKADYVGEVGANLHGG 71
           +++   +L +A     A         +TGDWGG R +L + G+ I  DY GE   N HGG
Sbjct: 6   RITPTLLLALASTTALASDDLMTRSTLTGDWGGLRHQLEEDGVKITGDYSGETAYNAHGG 65

Query: 72  YNHDKTARYADQFGLGVALDLQKLWGWDNTQAKIQLT--NRNGQNISNDRVGDPRAGTLS 129
            +  ++ARY+    LGV  DL KL+G DN   K+QLT  +R G + S D VG+       
Sbjct: 66  LH--RSARYSQNVKLGVQFDLSKLYGLDN-GGKVQLTINDRRGNSASEDLVGN-----RL 117

Query: 130 SSQEVYGRGHMVRLTQLWVQHQFLDGKLDVKAGYFGEGEDFNTFP----CEFQNLAFCGS 185
             QE YG G   RLT+L  +       L+VK GY   G D         C F N  FCG 
Sbjct: 118 PIQENYG-GLYTRLTELSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGH 176

Query: 186 QAGNWATGIWYNWPVMQAAVRVKYNITPEFYAQIGAYNQNP-SQLEHGNGFKLSGSGTKG 244
                    W N+P     VRVKY+++P +  ++ A+N +P S       + L    T G
Sbjct: 177 PLNMSGGSGWTNYPNAHLGVRVKYDLSPAWQLRVAAFNVDPESNGNSSRAWHLGPKHTTG 236

Query: 245 TVLPVELVWSPKVNNLPGEYRVGYYKSTADANDVRKDDNGDDAATTGKAFRSHDSKHGYW 304
           TV+PVELV+  +   LPGEY++GYY    D++DV++  + D+ +  G          G++
Sbjct: 237 TVVPVELVYKLQ-GELPGEYKLGYY---YDSSDVKRIGSDDEVSGRG----------GHY 282

Query: 305 FVAQQQLTTHNGDASRGLNVAANATFHDKDTNVVDNYQSLMFVYKGPFDARPKDDVGIGF 364
            +  Q +        R L+     +   K  +    +     V   PF+ RPKD V +G+
Sbjct: 283 LLVDQAVWNDQASPGRSLHAFGQYSASSKAASPFTKWYGAGVVLYKPFEGRPKDTVALGY 342

Query: 365 ARIHVND---DVKKNAELVNAANGVSDYDNPLFSPLRSTEYNYEINYGFHVTNWLTVRPN 421
            R   N    DV ++A   NA     D D        S E   E++YG+  T WL +RP+
Sbjct: 343 GRAVPNPRSRDVLEDAAF-NAGQQFPDID--------SAEQLIELSYGYQATPWLNLRPD 393

Query: 422 LQYITHPGGVD--EVDNALVAGLKIQSVF 448
           +QYI  PG     ++DNALV GL++++ F
Sbjct: 394 VQYIIEPGAFSGKDIDNALVVGLQVKATF 422