Pairwise Alignments

Query, 448 a.a., porin from Pseudomonas fluorescens FW300-N2E3

Subject, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  578 bits (1490), Expect = e-169
 Identities = 266/436 (61%), Positives = 330/436 (75%), Gaps = 3/436 (0%)

Query: 13  LSAVAVLTMAGNVHAADAFSADSKWMTGDWGGERTKLIDQGIDIKADYVGEVGANLHGGY 72
           L+  A+ T AG   A++ F++DS WM GDWGG R++L+++G D    Y GE+G+NLHGGY
Sbjct: 12  LALSALATPAG---ASEMFASDSPWMLGDWGGTRSELLEKGYDFTLGYTGEMGSNLHGGY 68

Query: 73  NHDKTARYADQFGLGVALDLQKLWGWDNTQAKIQLTNRNGQNISNDRVGDPRAGTLSSSQ 132
           +HD+TARY+DQF  G  LDL+K+ GW +T+ ++ +T R+G NISNDR+ DPR G  +S+Q
Sbjct: 69  DHDRTARYSDQFTFGSHLDLEKILGWHDTEFQLTVTERHGDNISNDRINDPRVGGFTSAQ 128

Query: 133 EVYGRGHMVRLTQLWVQHQFLDGKLDVKAGYFGEGEDFNTFPCEFQNLAFCGSQAGNWAT 192
           EV+GRG   RLTQ+W++ ++ DG LDVK G FGEGEDFN+FPC+FQNLAFCGSQ GNW  
Sbjct: 129 EVWGRGETWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWVG 188

Query: 193 GIWYNWPVMQAAVRVKYNITPEFYAQIGAYNQNPSQLEHGNGFKLSGSGTKGTVLPVELV 252
           GIWYNWPV Q A+RV+YN+TPE YAQ+G + QNPS LE GNGFKLSGSGT+G V+P ELV
Sbjct: 189 GIWYNWPVSQWALRVRYNLTPELYAQVGVFEQNPSNLESGNGFKLSGSGTQGAVMPFELV 248

Query: 253 WSPKVNNLPGEYRVGYYKSTADANDVRKDDNGDDAATTGKAFRSHDSKHGYWFVAQQQLT 312
           W+P++  L GEYR GYY S A A DV KD NG  AA +G A+RS  SKHG W  AQQQ+T
Sbjct: 249 WTPRIQGLKGEYRAGYYYSNAKAQDVLKDSNGQPAALSGAAYRSSSSKHGLWIGAQQQVT 308

Query: 313 THNGDASRGLNVAANATFHDKDTNVVDNYQSLMFVYKGPFDARPKDDVGIGFARIHVNDD 372
           +   D SRGL+V ANAT HDK TN +DNY     V+KGPFDAR KDD+G   AR+HVN  
Sbjct: 309 SLASDQSRGLSVFANATVHDKKTNAIDNYVQAGLVFKGPFDARAKDDIGFALARVHVNPA 368

Query: 373 VKKNAELVNAANGVSDYDNPLFSPLRSTEYNYEINYGFHVTNWLTVRPNLQYITHPGGVD 432
            +KNA LVN A G+ DYDNP F P++ TEY+ E+ YG H+ +WLTVRPNLQYI HPGGV 
Sbjct: 369 YRKNARLVNQAAGLYDYDNPGFLPVQDTEYSAELYYGIHLADWLTVRPNLQYIRHPGGVS 428

Query: 433 EVDNALVAGLKIQSVF 448
           +VD AL+ GLKIQS F
Sbjct: 429 QVDGALIGGLKIQSSF 444