Pairwise Alignments

Query, 448 a.a., porin from Pseudomonas fluorescens FW300-N2E3

Subject, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  654 bits (1688), Expect = 0.0
 Identities = 305/438 (69%), Positives = 357/438 (81%), Gaps = 2/438 (0%)

Query: 13  LSAVAVLTMAGN--VHAADAFSADSKWMTGDWGGERTKLIDQGIDIKADYVGEVGANLHG 70
           L ++A+L + G+    AA+AFS++SKWMTGDWGG RT+L+D+G D   DYVGEV  NLHG
Sbjct: 10  LGSLALLALVGSSGTQAAEAFSSESKWMTGDWGGTRTELLDKGYDFTLDYVGEVAGNLHG 69

Query: 71  GYNHDKTARYADQFGLGVALDLQKLWGWDNTQAKIQLTNRNGQNISNDRVGDPRAGTLSS 130
           GYN DKTARY+DQF LG  LDLQK+ GW + + K+ +T R+G+N+SNDR+ DPRAG  SS
Sbjct: 70  GYNDDKTARYSDQFALGAHLDLQKILGWHDAEFKLAITERSGRNLSNDRISDPRAGQFSS 129

Query: 131 SQEVYGRGHMVRLTQLWVQHQFLDGKLDVKAGYFGEGEDFNTFPCEFQNLAFCGSQAGNW 190
            QEV+GRG   RLTQ+W++ ++ DG LDVK G FGEGEDFN+FPC+FQNLAFCGSQ GNW
Sbjct: 130 VQEVWGRGQTWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNW 189

Query: 191 ATGIWYNWPVMQAAVRVKYNITPEFYAQIGAYNQNPSQLEHGNGFKLSGSGTKGTVLPVE 250
             GIWYNWPV Q A+RVKYNITPEF+ Q+GA+ QNPS LE GNGFKLSGSGTKG +LPVE
Sbjct: 190 VGGIWYNWPVSQWALRVKYNITPEFFVQVGAFEQNPSNLETGNGFKLSGSGTKGAILPVE 249

Query: 251 LVWSPKVNNLPGEYRVGYYKSTADANDVRKDDNGDDAATTGKAFRSHDSKHGYWFVAQQQ 310
            VWSPKVN LPGEYR+GYY STA A+DV  D NG+  A TG+AF+SH SKHG+W VAQQQ
Sbjct: 250 AVWSPKVNGLPGEYRLGYYYSTAKADDVYDDVNGNPQALTGEAFKSHSSKHGWWVVAQQQ 309

Query: 311 LTTHNGDASRGLNVAANATFHDKDTNVVDNYQSLMFVYKGPFDARPKDDVGIGFARIHVN 370
           +T H GD +RGL++ AN T HDK TNVVDNYQ +  VYKG FDARPKDD+G G ARIHVN
Sbjct: 310 VTAHGGDVNRGLSLFANFTVHDKATNVVDNYQQVGLVYKGAFDARPKDDIGFGVARIHVN 369

Query: 371 DDVKKNAELVNAANGVSDYDNPLFSPLRSTEYNYEINYGFHVTNWLTVRPNLQYITHPGG 430
           DDVKK AEL+NA +G++DYDNP F PL+ TEYN E+ YGFHVTNWLTVRPNLQYI  PGG
Sbjct: 370 DDVKKRAELLNAQSGINDYDNPGFVPLQRTEYNAELYYGFHVTNWLTVRPNLQYIKSPGG 429

Query: 431 VDEVDNALVAGLKIQSVF 448
           VDEVDNALVAGLKIQS F
Sbjct: 430 VDEVDNALVAGLKIQSSF 447