Pairwise Alignments

Query, 270 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 257 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  139 bits (350), Expect = 6e-38
 Identities = 91/264 (34%), Positives = 139/264 (52%), Gaps = 15/264 (5%)

Query: 7   ILGGLLLVGCAGLAGCAGQHSAAALQQASADFQKVKEDSNVLRIAPKDVIRAGESLARAD 66
           +L  L LV     AGCA       L QA + F  ++E      +A  +   A  +L RA+
Sbjct: 9   VLSALSLV----FAGCATPPENPQLLQARSLFSSLQEKPESNTLAAVETRIASNALDRAN 64

Query: 67  RLSTYWGSGPDVKHYAYLSQRYSEIARQHTEQALNDERGAKLELERQRLQLALRENKLLS 126
           ++S +  + P +   AYL+ +   +A Q       D +   + ++R ++QL +R  +L +
Sbjct: 65  QVSLHDRTDPQIDQLAYLATQKIALAEQTIVGRKTDAQLDNIAVDRTQVQLDVRTAQLKA 124

Query: 127 VQQQGKWLEEQIINLATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQLNPK 186
           +Q            +    T+RG V+T GDVLFDTG+A+LK  + R    +  FL  NP+
Sbjct: 125 LQA-----------MKAQPTERGQVITFGDVLFDTGKADLKAGSQRDFQGLANFLVQNPE 173

Query: 187 RVVRIEGYADNTGGKQDNLKLSRDRAQSVADMLIDLGIEDKRIQVEGYGDEYPVEANASE 246
           R VR+EG+ D+ GG   N  LS  RAQ+VA  L  LG+  +RI V GYG ++PV  N S 
Sbjct: 174 RQVRVEGFTDSVGGDAYNQSLSERRAQAVARGLQRLGVGIERIAVIGYGKQFPVADNQSA 233

Query: 247 RGRAQNRRVEIVFSDEKGQLGAAR 270
           + R  NRRVE++ S++   + A R
Sbjct: 234 QSRQLNRRVEVIVSNDASAVSARR 257