Pairwise Alignments

Query, 270 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

Subject, 261 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  130 bits (328), Expect = 2e-35
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 11/251 (4%)

Query: 12  LLVGCAGLAGCAGQHSAAALQQASADFQKVKEDSNVLRIAPKDVIRAGESLARADRLSTY 71
           LL     LA C+   +A  L+ A  +F  ++ +    ++A  +   A E L +AD+    
Sbjct: 10  LLAMSVALAACSTPPNAN-LENARTNFSSLQTNPQATKLAALETKDASEWLDKADKAYRD 68

Query: 72  WGSGPDVKHYAYLSQRYSEIARQHTEQALNDERGAKLELERQRLQLALRENKLLSVQQQG 131
                 V   AYL+ +  E+A+       ++ +      ER R  L  R+ ++  +Q   
Sbjct: 69  KEDEKKVDQLAYLTNQRVEVAKDTIVLRESEAKLKNAGDERARALLDARDAQIKQLQD-- 126

Query: 132 KWLEEQIINLATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQLNPKRVVRI 191
                   +L   QTDRG ++T GDVLF T +++LK+S    + K+ QFL+ NP R V +
Sbjct: 127 --------SLNAKQTDRGTLVTFGDVLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIV 178

Query: 192 EGYADNTGGKQDNLKLSRDRAQSVADMLIDLGIEDKRIQVEGYGDEYPVEANASERGRAQ 251
           EGY D+TG    N  LS  RA SV   L   G++  RI  +GYG EYPV  N S  GRA 
Sbjct: 179 EGYTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVTQGYGKEYPVADNGSVSGRAM 238

Query: 252 NRRVEIVFSDE 262
           NRRVE+  S++
Sbjct: 239 NRRVEVTISND 249