Pairwise Alignments

Query, 567 a.a., poly(R)-hydroxyalkanoic acid synthase from Pseudomonas fluorescens FW300-N2E3

Subject, 559 a.a., poly(3-hydroxyalkanoate) polymerase 1 from Pseudomonas putida KT2440

 Score =  304 bits (778), Expect = 7e-87
 Identities = 185/522 (35%), Positives = 273/522 (52%), Gaps = 25/522 (4%)

Query: 58  ADYQAQWGQLGQQLLTGQSF---SFDDRRFASGNWSE-PLFGSLAAFYLLNSSFLLKLLD 113
           A + A +G   + +L G+S      DDRRF    WS  PL+      YL   ++  +L D
Sbjct: 50  AKHVAHFGLELKNVLLGKSSLAPDSDDRRFNDPAWSNNPLYRRYLQTYL---AWRKELQD 106

Query: 114 KLLIDDKKPRQ--RLRYLVEQAIAASAPSNFLVSNPDALQRAVETKGASLITGLQHLASD 171
            +   D  P+   R ++++     A AP+N L SNP A++R  ET G SL+ GL +LA D
Sbjct: 107 WVSSSDLSPQDISRGQFVINLMTEAMAPTNTL-SNPAAVKRFFETGGKSLLDGLSNLAKD 165

Query: 172 M--NEGKMRQCDSGAFKVGVDLANTPGEIVFENHLFQLIQYYPQSETQYRHPVFVVPPSI 229
           M  N G   Q +  AF+VG +L  + G +V+ N + +LIQY P +E  +  P+ VVPP I
Sbjct: 166 MVNNGGMPSQVNMDAFEVGKNLGTSEGAVVYRNDVLELIQYSPITEQVHARPLLVVPPQI 225

Query: 230 NKYYILDLRPDNSMVRHLLEKGHPVFLMSWRN---FDEEHAGTTWDDLIEHGVIDALQVT 286
           NK+Y+ DL P+ S+ R  L      F++SWRN      E   +T+ D ++  V   L +T
Sbjct: 226 NKFYVFDLSPEKSLARFCLRSQQQTFIISWRNPTKAQREWGLSTYIDALKEAVDAVLSIT 285

Query: 287 REISGEQRLNCVGFCIGGTLLSTALAVLAARGDREIASVSLLTTFLDYLDTGPIDIFVDE 346
               G + LN +G C GG   +  +   AA G+ ++ +++LL + LD      + +FVDE
Sbjct: 286 ----GSKDLNMLGACSGGITCTALVGHYAAIGENKVNALTLLVSVLDTTMDNQVALFVDE 341

Query: 347 ELVAYRERTIGGMNGPIGLFRGEDMGNTFSLLRPNDLWWNYNVDKYLKGQKPIPLDLLFW 406
           + +   +R     +   G+  G +M   F+ +RPNDL WNY V+ YL G +P   D+LFW
Sbjct: 342 QTLEAAKRH----SYQAGVLEGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFW 397

Query: 407 NNDSTNLPGPMYCWYLRHTYLQNDL-KSGELECCGVKLDLRAIDAPAYILATHDDHIVPW 465
           NND+T LP   +   L   +  N L +   LE CG  +DL+ +    Y LA  +DHI PW
Sbjct: 398 NNDTTRLPAAFH-GDLIEMFKSNPLTRPDALEVCGTAIDLKQVKCDIYSLAGTNDHITPW 456

Query: 466 KSAYASTNLLSGTKRFVLGASGHIAGVINPPAKQKRHYWTNNRVTKNPETWFKNAEQQPG 525
            S Y S +L  G   FVL  SGHI  ++NPP   K  + T      +P  W +NA +   
Sbjct: 457 PSCYRSAHLFGGKIEFVLSNSGHIQSILNPPGNPKARFMTGADRPGDPVAWQENAIKHAD 516

Query: 526 SWWNDWFNWLAGHSGERQPAVAHTGNEKFPPLEPAPGSYVKQ 567
           SWW  W +WL   +G  + A    GN  +   E +PG+YV +
Sbjct: 517 SWWLHWQSWLGERAGALKKAPTRLGNRTYAAGEASPGTYVHE 558