Pairwise Alignments

Query, 396 a.a., 3-methylitaconate isomerase from Pseudomonas fluorescens FW300-N2E3

Subject, 359 a.a., putative isomerase from Pseudomonas putida KT2440

 Score =  176 bits (447), Expect = 7e-49
 Identities = 132/387 (34%), Positives = 184/387 (47%), Gaps = 39/387 (10%)

Query: 8   KIPATYMRGGTSKGVFFSLQDLPESAQVPGPSRDALLLRVIGSPDPYEKQIDGMGGATSS 67
           +IP   MRGGTSKG FF   DLP +       RD LL+ ++GS   +E +IDG+GG +  
Sbjct: 3   RIPCVLMRGGTSKGPFFHAWDLPANVV----ERDELLINLMGSG--HELEIDGIGGGSPQ 56

Query: 68  TSKTVIVSKSIKADHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGSFAISSGLVEASRVP 127
           TSK  I+S S+ AD DVDYLF QV + +  VD + NCGN+  AVG FAI  GLV+     
Sbjct: 57  TSKVAIISPSLHADADVDYLFVQVMVAQRRVDTAPNCGNMLCAVGPFAIEQGLVKG---- 112

Query: 128 RNGIAVVRIWQANIGKTIIAHVPITDGAVQETGDFELDGVTFPAAEVQLEFMNPAAEEEG 187
           + G  +VRI   N G  + + V    G V+  G   +DGV   AA V L F++    +  
Sbjct: 113 QEGKTLVRIRNLNTGTFVNSLVETPGGIVRYEGRTAIDGVPGTAAPVHLTFLDAVGSKT- 171

Query: 188 AGGSMFPTGNLVDDLEVPGVGTLKVTMINAGIPTIFVNAEAIGYTGTELQGDINGDPKAL 247
             G +FPTG   D ++      + VT I+  +P + V A  +G +G+E    ++ +   L
Sbjct: 172 --GKLFPTGKAQDVID-----GVPVTCIDMAMPMMVVEASQLGVSGSETPAQLDANSALL 224

Query: 248 AMFETIRAYGALRMGLIQNLEDAAKRQHTPKVAFVARPADYLASSGKPVAAGDVDLLVRA 307
              E +R      MGL             PK   V++P              D  L VR 
Sbjct: 225 ERLEALRLKAGKAMGL-----GDVSGMVIPKPVLVSKP------------RYDGTLQVRY 267

Query: 308 LSMGKLHHAMMGTAAVAIGTAAAIDGTLVN--LAAGGIPRNAVRFGHPSGTLRVGAEAQQ 365
                 H A+  T AV + TA    GT++   L  G      VR  HPSG + V      
Sbjct: 268 FMPHNCHRALAITGAVGLATACVSPGTVIADLLGEGAQQLAQVRLEHPSGGIDVALTRSG 327

Query: 366 VDGEWTVTKAIMSRSARVLMEGWVRVP 392
            +G+    +A + R+AR L  G+V  P
Sbjct: 328 AEGQ--TIQASVVRTARRLFSGFVYAP 352