Pairwise Alignments

Query, 396 a.a., 3-methylitaconate isomerase from Pseudomonas fluorescens FW300-N2E3

Subject, 350 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  184 bits (466), Expect = 4e-51
 Identities = 130/385 (33%), Positives = 188/385 (48%), Gaps = 37/385 (9%)

Query: 8   KIPATYMRGGTSKGVFFSLQDLPESAQVPGPSRDALLLRVIGSPDPYEKQIDGMGGATSS 67
           KIP   MRGGTS+G F   + LPE        RD +L+ ++GS +  E  IDG+GG    
Sbjct: 3   KIPCVMMRGGTSRGAFLLAEHLPEDQT----QRDKILMAIMGSGNDLE--IDGIGGGNPL 56

Query: 68  TSKTVIVSKSIKADHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGSFAISSGLVEASRVP 127
           TSK  I+S+S     DVDYLF QV + +  VD + NCGN+ + VG+FAI +GL+ A+   
Sbjct: 57  TSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAAT--- 113

Query: 128 RNGIAVVRIWQANIGKTIIAHVPITDGAVQETGDFELDGVTFPAAEVQLEFMNPAAEEEG 187
            + +  VRI   N G  I A V   +G V+  G   +DGV   AA V L F+N A  +  
Sbjct: 114 -SPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKT- 171

Query: 188 AGGSMFPTGNLVDDLEVPGVGTLKVTMINAGIPTIFVNAEAIGYTGTELQGDINGDPKAL 247
             G +FPT N +D  +      + VT I+  +P + + AE +G TG EL  +++ D   L
Sbjct: 172 --GKVFPTDNQIDYFD-----DVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALL 224

Query: 248 AMFETIRAYGALRMGLIQNLEDAAKRQHTPKVAFVARPADYLASSGKPVAAGDVDLLVRA 307
           A  E+IR      MGL               V+ +  P   L S  +   A    + VR 
Sbjct: 225 ARIESIRLQAGKAMGL-------------GDVSNMVIPKPVLISPAQKGGA----INVRY 267

Query: 308 LSMGKLHHAMMGTAAVAIGTAAAIDGTLVNLAAGGIPRNAVRFGHPSGTLRVGAEAQQVD 367
                 H A+  T A+AI ++ A++GT+       +    +   HPSG L V    +  D
Sbjct: 268 FMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQD 327

Query: 368 GEWTVTKAIMSRSARVLMEGWVRVP 392
              T  +A + R+ R +  G V +P
Sbjct: 328 A--TTLRASVIRTTRKIFSGEVYLP 350