Pairwise Alignments

Query, 1162 a.a., chromosome segregation protein SMC from Pseudomonas fluorescens FW300-N2E3

Subject, 1172 a.a., Chromosome partition protein smc from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  725 bits (1872), Expect = 0.0
 Identities = 452/1194 (37%), Positives = 676/1194 (56%), Gaps = 57/1194 (4%)

Query: 1    VRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60
            VRL  IKL+GFKSF +PT    P  +  VVGPNGCGKSNI+DAVRWV+GES A  LRGES
Sbjct: 1    VRLNSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES 60

Query: 61   MTDVIFNGSTSRKPVSQASIELVFDNSDGTLIGEYAAYAEISIRRKVTRDSQTTYYLNGT 120
            M DVIFNG+T+RK  S++S+ELVFDNSD    G++  + EI+++R +TRD  ++YY+N  
Sbjct: 61   MQDVIFNGTTTRKQASRSSVELVFDNSDHRAGGQWGQFGEIAVKRVLTRDGTSSYYINNQ 120

Query: 121  KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIESKPEDLRNFIEEAAGISKYKERRRET 180
              RRRD+ D+FLGTGLGPR+Y+II QG IS++IESKPE+LR F+EEAAG+SKYKERRRET
Sbjct: 121  PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERRRET 180

Query: 181  ENRIRRTHENLARLTDLRDELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQEL 240
             NR+  T ENL R+ D+  EL   L++L +QA+ A +Y   ++     + QL  L+  E 
Sbjct: 181  ANRLADTRENLTRVEDILRELNANLDKLEKQAEVAARYNHLQSSATLKQQQLWFLKRAEA 240

Query: 241  NEQVGQREAIIGNQEISFEALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDI 300
                 + +          E+  A+ R  ++ +E +R  H+   ++ N  QG+ Y    ++
Sbjct: 241  ESDQVKVKTDAAQAVNDLESRTADLRRVESELETIRQAHYAAGDQVNQAQGKLYEASAEV 300

Query: 301  ARVEQSIQ---HGQQRLRQLQDDLKEAERSRLETESHLGHDRTL-LATLGEELDMLTPEQ 356
             ++E  I+    G+QR+ Q    LKE    +L T +    D  + L  L E +     + 
Sbjct: 301  GKLEAEIRFVVEGRQRVEQRLAQLKE----QLGTWATRSQDAAVELEQLAESMVQAEDQS 356

Query: 357  EVTSAAAEEAAAALEESETTMHGWQEQWDSFNLRSAEPRRQAEVQQSRIQQLETSMERLA 416
             V +A  EE + AL   E ++   Q + +       + ++Q +V  +  + +E     L 
Sbjct: 357  VVLAAQGEEQSGALPALEDSLRQAQARANEQRASVTQVQQQIQVLAAEQRNVEEQSRALN 416

Query: 417  ERQRRLAEERDLLSAAPEDAAILDLSEQLAASEATLE--DLQASE-EAQVERLEQLRQEL 473
            +R+ RL  +R+ L AAP++A +L    QLA+++ T E  D    E +  V +L++ R+  
Sbjct: 417  QRRERLVADRNAL-AAPDEARLLSAQTQLASAQETAELNDAVLHELQDSVPQLDEARRAA 475

Query: 474  QLALQNQQQAQGDLQRLNGRLASLEALQQAALDPGTGAAEWLREQHLAERPRLAEGLKVE 533
            Q A+  +   Q DL   + R+ +L+ALQ      G     WL +  L     L   + +E
Sbjct: 476  QQAVNQESAKQADL---SARMEALKALQDKVKTDGK-LKPWLAKHGLESLQGLWSRIHIE 531

Query: 534  AGWELAVETVLGADLQAVLV----------DDFAGFDLSGFAQGDLRLLSPASDGVR--I 581
             GWE A+E  L   L A+ V          +D     L+ ++       + ++ G++  +
Sbjct: 532  TGWENALEAALRERLSALEVSRLDMVRAFGNDAPPAKLAFYSPPPGAAAASSATGLKPLV 591

Query: 582  PGSLLDKVEAQIDLSPWLGQVKPVDSLEQALSLRGQLSVGESLISRDGYWVGRHFLRVRR 641
                L+    Q  L+ WL       SLE+AL+ R QL  GE +    G+ V  H +    
Sbjct: 592  QWLRLNDAGQQALLAEWLHGCLTASSLEEALAQRAQLQPGEVIFVASGHAVTAHSVSFYA 651

Query: 642  ASEAESGMLARGQEIQRLGLEREEREATVETLETTL-----------QNLRAQQRQQENG 690
                ++G+LAR QEI+ +  + + +    E   + L           Q L + +R     
Sbjct: 652  PDSEQAGLLARAQEIENIDKQLKAQVLIAEQARSALIRAEAAYTDASQRLVSARRDAAES 711

Query: 691  REHLRRLLQDEARQQGELKAQLSAGKAKAEQLTLRRTRLDEELGELAEQRALEHEQIGES 750
            R     L Q EA +  +L  Q    +A++EQ+      +D +L EL E+R        E+
Sbjct: 712  RSRAHEL-QVEALRLTQLAEQT---RARSEQIGADLAEVDAQLEELQERRVT-----AEA 762

Query: 751  RLQLQEALDSMAIDTEQRELLLAQRDSLRER-LDRVRQEARQHKDHAHQLAVRLGSLKAQ 809
            R    E LD    D+++R      +    ER L++ R++ R  +  A +    L SL+A+
Sbjct: 763  RF---EELDMQLADSQERHAQFDDKVIEAERALNQAREQQRSLERTAQEAVFALRSLQAR 819

Query: 810  HDSTRQALERLELQSERLTEKREQLSLNLEEGEAPLEELRLKLEELLDKRMSVDEELRTA 869
                ++++E    Q + L +++++ S  L  G       +  L+  L  +M  ++ L   
Sbjct: 820  QSELQRSMETAASQEKSLADEQQRASEEL--GRLNDAAAQAGLQNALAMKMEREQALGAL 877

Query: 870  QIALEDADRELRDAEKRRSQAEQQSQLIRGQLEQQRMEWQALTVRRKTLQDQLLEDGYDL 929
            +   ++   +LR +++RR Q E++ + +R ++   +++ QA  +  +    QLLE+    
Sbjct: 878  RSQYDELTAKLRASDERRLQLERELEPLRNRITDFQLKEQAARLGVEQYS-QLLEEAQAD 936

Query: 930  QGVLATLVAEANEK--DAEEELERIAARIQRLGAINLAAIDEYQQQSERKRYLDAQDADL 987
               +A  V E N +    + E++R+   IQ LGA+NLAA+DE     ERK +LDAQ ADL
Sbjct: 937  LAAVAQSVTEGNVRLSGLQSEIDRLHREIQSLGAVNLAALDELTAARERKTFLDAQTADL 996

Query: 988  VEALDTLENVIRKIDKETRNRFKDTFDQINGGLQALFPKVFGGGNAYLELTGEDLLDTGV 1047
            VEA++TLE+ I+KID ETR     TFD +NG    +FP++FGGGNA L +TGE++LD GV
Sbjct: 997  VEAMNTLEDAIKKIDNETRELLGSTFDTVNGHFGRMFPELFGGGNAKLMMTGEEILDAGV 1056

Query: 1048 TIMARPPGKKNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPLDDANVGRYA 1107
             +MA+PPGKKN TIHLLSGGEKALTA+ALVFAIF+LNPAPFC+LDEVDAPLDDAN  RYA
Sbjct: 1057 QVMAQPPGKKNQTIHLLSGGEKALTAIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYA 1116

Query: 1108 RLVKEMSQTVQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDVEEAMAMVD 1161
            +LV  MS+  QF++I+HNKIAMEMA+QL+GVTM E G SR+VAVD+E A  M++
Sbjct: 1117 KLVTAMSKETQFLFISHNKIAMEMAEQLIGVTMQEQGVSRIVAVDMESAAGMLE 1170