Pairwise Alignments
Query, 1162 a.a., chromosome segregation protein SMC from Pseudomonas fluorescens FW300-N2E3
Subject, 925 a.a., Chromosome partition protein Smc from Methylophilus sp. DMC18
Score = 89.0 bits (219), Expect = 2e-21
Identities = 146/618 (23%), Positives = 257/618 (41%), Gaps = 75/618 (12%)
Query: 304 EQSIQHGQQRLRQLQDDLKEAERS---RLETESHLGHDRTLLATLGEELDMLTPEQEVTS 360
EQ +Q+ Q L+ L+ L+ E+ LE + L+ + L+ ++E
Sbjct: 206 EQELQYTQNNLKALEHSLQTQEQRVNRYLEWQQLTQEQALLVEEVKPRLEFYQLQEE--- 262
Query: 361 AAAEEAAAALEESETTMHGWQEQWDSFNLRSAEPRRQAEVQQSRIQQLETSMERLAERQR 420
AE AA +L+ + G Q + + QAE QS+ Q L+++
Sbjct: 263 --AERAARSLDANRKEREGLQADLSAKTSELDYHKTQAEHLQSQQQATRLHEADLSQQVN 320
Query: 421 RLAEERDLLSAAPEDAAILDLSEQLAASEATLEDLQASEEAQVERLEQLRQELQLALQNQ 480
+L +E L A E +L+ L+A + +QA+ E + +LEQ R LQ L +
Sbjct: 321 QLNKEEGKLEAVLEQKKLLEAQAALSA-----DVVQATTE--LGQLEQQRSALQNRLWAK 373
Query: 481 QQAQGDLQRLNGRLASLEALQQAALDPGTGAAEWLREQHLAERPRLAEGLKV-EAGWELA 539
QQ Q Q+ L +L + ++A T + L + ++A LA+ L+V +AGW+ A
Sbjct: 374 QQQQ---QQWQHTLENLSSGRRADPHEVTEFRQTLSKANIAH-DTLADILEVTDAGWQTA 429
Query: 540 VETVLGADLQAVLVDDFAGFDLSGFAQGD----LRLLSPASDGVRIP--GSLLDKVEAQI 593
VE VL +++ + + FA G+ L+ P +P GSLL+ ++ +
Sbjct: 430 VEAVLAPFAHVIMLHSEKQAE-TAFALGESLKYRHLIVPERQLAGLPPKGSLLEVIKLKQ 488
Query: 594 DLSPWLGQVKPVDSLEQALSLRGQLSVGESLISRDGYWVGRHFLRVRRASEAESGMLARG 653
++PW+ + + + L GE ++R GY R R +E G
Sbjct: 489 PVAPWMLAMLERTQRVEDTAAGVALPRGEDWVTRQGYLRERRGGRHAAPNEPRFGK---- 544
Query: 654 QEIQRLGLEREEREATVETLETTLQNLRAQQRQQENGREHLRRLLQDEA---------RQ 704
++ L ++ E + L+ L LR Q + +N + Q A RQ
Sbjct: 545 ARLESLRQNLQQIETEINALQDELHPLRQQIQTLKNALAGVDAAAQLAARAEQFASVERQ 604
Query: 705 QGELKAQLSAGKAKAEQLTLRRTRLDEELGELAEQRALEHEQIGESRLQLQEALDSMAID 764
++KAQ A K +++ T+L+E + E + E I QLQ+ + +D
Sbjct: 605 YADVKAQRQAVGEKLYEVSQLNTQLEERIRESIRAQ----ESIRNKIAQLQKDI----VD 656
Query: 765 TEQRELLLAQRDSLRERLDRVRQEARQHKDHAHQLAVRLGSLKAQHDSTRQALERLELQS 824
E RE Q RL+R+R + ++ + A + +Q LE+ E S
Sbjct: 657 KENREGWAEQ----ERRLERIRHDQQKLPADWQETA-----------ANKQLLEKWE--S 699
Query: 825 ERLTE-KREQLSLNLEEGEAPLEELRLKLEELLDKRMSVDEELRTAQIALEDADRELRDA 883
RL + + EQ++ LE + + + + +M D + ED + RD
Sbjct: 700 PRLVDIQIEQIAKRLETQSWETDPYVIAMRD----KMQADYLTQK-----EDVESRERDN 750
Query: 884 EKRRSQAEQQSQLIRGQL 901
++Q E + G+L
Sbjct: 751 RAAQTQTEHAREAYIGRL 768
Score = 61.2 bits (147), Expect = 4e-13
Identities = 135/605 (22%), Positives = 231/605 (38%), Gaps = 120/605 (19%)
Query: 2 RLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVM-----GESSAKN- 55
RL+ + ++ FV P +++ +VGPNG GK+ ++DA+R ++ G S K
Sbjct: 6 RLEVVHWDYWQRFVVP----LDASIITIVGPNGSGKTTLLDAMRTLLALECSGSGSGKRD 61
Query: 56 ------LRGES---MTDVIFN----GSTSRK---PVSQASIELV--FDNSDGTLIGEY-A 96
GE + V+ N GS+ R P Q I L + G + Y
Sbjct: 62 YKRYVRRNGEDFCWLLGVVDNSRPVGSSKRPFGIPFMQDKITLACHIEKKGGDWVRHYWV 121
Query: 97 AYAEISIRRKVTRDSQTTYYLNGTKCRRRDITDIFLGTGLGPRSYSII--EQGMISKLIE 154
A E++++ + G + RD + GL P ++ EQG KL E
Sbjct: 122 ADGEVALKDIAQQ---------GQEFGVRDYQRLLHEAGLSPAIARVLSLEQGQTDKLCE 172
Query: 155 SKPEDLRNFIEEAAG----ISKYKERR---RETENRIRRTHENLARLTDLRDELERQLER 207
KP +L + + + G +++Y+E R R TE ++ T NL L L+ Q +R
Sbjct: 173 YKPRELLDLVFDVFGDKEILTRYQEARQHQRATEQELQYTQNNLKA---LEHSLQTQEQR 229
Query: 208 LHRQAQAAEKYQEYKAEERQLKAQLSALRWQELNEQVG--------QREAIIGN-----Q 254
++R + + QE ++K +L + QE E+ +RE + +
Sbjct: 230 VNRYLEWQQLTQEQALLVEEVKPRLEFYQLQEEAERAARSLDANRKEREGLQADLSAKTS 289
Query: 255 EISFEALVAEQRNADASIERLRDGHHDLSERFNLV---QGRFYSV--------------- 296
E+ + AE + RL + DLS++ N + +G+ +V
Sbjct: 290 ELDYHKTQAEHLQSQQQATRLHEA--DLSQQVNQLNKEEGKLEAVLEQKKLLEAQAALSA 347
Query: 297 --------GGDIARVEQSIQH----GQQRLRQLQDDLKEAERSRLETESHLGHDRTLLAT 344
G + + ++Q+ QQ+ +Q Q L+ R + R L+
Sbjct: 348 DVVQATTELGQLEQQRSALQNRLWAKQQQQQQWQHTLENLSSGRRADPHEVTEFRQTLSK 407
Query: 345 LGEELDMLTPEQEVTSA---AAEEAAAALEESETTMHGWQEQWDSFNLRSAEPRRQAEVQ 401
D L EVT A A EA A +H ++ +F L + R V
Sbjct: 408 ANIAHDTLADILEVTDAGWQTAVEAVLAPFAHVIMLHSEKQAETAFALGESLKYRHLIVP 467
Query: 402 QSRIQQL--ETSMERLAERQRRLAE------ERDLLSAAPEDAAILDLSEQLAASEATLE 453
+ ++ L + S+ + + ++ +A ER L E + L
Sbjct: 468 ERQLAGLPPKGSLLEVIKLKQPVAPWMLAMLERTQRVEDTAAGVALPRGEDWVTRQGYLR 527
Query: 454 DLQASEEAQVE-------RLEQLRQELQL------ALQNQ-QQAQGDLQRLNGRLASLEA 499
+ + A RLE LRQ LQ ALQ++ + +Q L LA ++A
Sbjct: 528 ERRGGRHAAPNEPRFGKARLESLRQNLQQIETEINALQDELHPLRQQIQTLKNALAGVDA 587
Query: 500 LQQAA 504
Q A
Sbjct: 588 AAQLA 592
Score = 60.1 bits (144), Expect = 8e-13
Identities = 85/369 (23%), Positives = 155/369 (42%), Gaps = 37/369 (10%)
Query: 773 AQRDSLRERLDRVRQEARQHKDHAHQLAVRLGSLK---------AQHDSTRQALERLELQ 823
A+ +SLR+ L ++ E +D H L ++ +LK AQ + + +E Q
Sbjct: 545 ARLESLRQNLQQIETEINALQDELHPLRQQIQTLKNALAGVDAAAQLAARAEQFASVERQ 604
Query: 824 SERLTEKREQLSLNLEEGEAPLEELRLKLEELLDKRMSVDEELRTAQIALEDADRELRDA 883
+ +R+ + L E + +L +LEE + + + E +R L+ +++ D
Sbjct: 605 YADVKAQRQAVGEKLYE----VSQLNTQLEERIRESIRAQESIRNKIAQLQ---KDIVDK 657
Query: 884 EKRRSQAEQQSQLIRGQLEQQRM--EWQALTVRRKTLQDQLLEDGYDLQGVLATLVAEAN 941
E R AEQ+ +L R + +QQ++ +WQ ++ L+ D+Q +A+
Sbjct: 658 ENREGWAEQERRLERIRHDQQKLPADWQETAANKQLLEKWESPRLVDIQ---IEQIAKRL 714
Query: 942 EKDAEEELERIAARIQRLGAINLAAIDEYQQQSERKRYLDAQDADLVEA-LDTLENVIRK 1000
E + E + A ++ A L ++ + + R Q EA + L + K
Sbjct: 715 ETQSWETDPYVIAMRDKMQADYLTQKEDVESRERDNRAAQTQTEHAREAYIGRLRYSVSK 774
Query: 1001 IDKETRNRFKDTFDQINGGLQALFPKVFGGGNAYLELT-GEDLLDTGVTIMARPPGKKNS 1059
K + K ++ AL A LE+ G D D G++ M
Sbjct: 775 YSKNLKELAKMADVDVDCAPVALEADDLTLSQAGLEVRFGFD--DKGLSGMNDGDA---- 828
Query: 1060 TIHLLSGGEKALTALALVFAIF--KLNPAPFCMLDEVDAPLDDANVGRYARLVK-EMSQT 1116
SGG++ + +L L+ A+ + P F +DE A LD N+ R AR ++ +Q
Sbjct: 829 -----SGGQQVMKSLILLVALMMEETRPGGFVFIDEPFAHLDIFNIKRVARFLQATKAQY 883
Query: 1117 VQFIYITHN 1125
+ +THN
Sbjct: 884 LLTTPVTHN 892
Score = 39.3 bits (90), Expect = 1e-06
Identities = 76/394 (19%), Positives = 155/394 (39%), Gaps = 34/394 (8%)
Query: 642 ASEAESGMLARGQEIQRLGLEREEREATVETLETTLQNLRAQQRQQENGREHLRRLLQDE 701
A A + A +E + L + + + ++ +T ++L++QQ+ L + +
Sbjct: 263 AERAARSLDANRKEREGLQADLSAKTSELDYHKTQAEHLQSQQQATRLHEADLSQQVNQL 322
Query: 702 ARQQGELKAQLSAGKAKAEQLTLRR--TRLDEELGELAEQRALEHEQIGESRLQLQEALD 759
+++G+L+A L K Q L + ELG+L +QR+ ++ + Q Q+
Sbjct: 323 NKEEGKLEAVLEQKKLLEAQAALSADVVQATTELGQLEQQRSALQNRLWAKQQQQQQWQH 382
Query: 760 SMAIDTEQRELLLAQRDSLRERLDRVR------QEARQHKDHAHQLAVRLGSLKAQH--- 810
++ + R + R+ L + + + D Q AV H
Sbjct: 383 TLENLSSGRRADPHEVTEFRQTLSKANIAHDTLADILEVTDAGWQTAVEAVLAPFAHVIM 442
Query: 811 -DSTRQALERL----ELQSERLTEKREQLSLNLEEGEAPLEELRLK------LEELLDKR 859
S +QA L+ L QL+ L + LE ++LK + +L++
Sbjct: 443 LHSEKQAETAFALGESLKYRHLIVPERQLA-GLPPKGSLLEVIKLKQPVAPWMLAMLERT 501
Query: 860 MSVDEELRTAQIALEDADR------ELRDAEKRRSQAEQQSQLIRGQLEQQRMEWQALTV 913
V++ A +AL + LR+ R A + + + +LE R Q +
Sbjct: 502 QRVEDT--AAGVALPRGEDWVTRQGYLRERRGGRHAAPNEPRFGKARLESLRQNLQQIET 559
Query: 914 RRKTLQDQ---LLEDGYDLQGVLATLVAEANEKDAEEELERIAARIQRLGAINLAAIDEY 970
LQD+ L + L+ LA + A A E+ + + + A A ++
Sbjct: 560 EINALQDELHPLRQQIQTLKNALAGVDAAAQLAARAEQFASVERQYADVKAQRQAVGEKL 619
Query: 971 QQQSERKRYLDAQDADLVEALDTLENVIRKIDKE 1004
+ S+ L+ + + + A +++ N I ++ K+
Sbjct: 620 YEVSQLNTQLEERIRESIRAQESIRNKIAQLQKD 653
Score = 32.0 bits (71), Expect = 2e-04
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 823 QSERLTEKREQLSLNLEEGEAPLEELRLKLEELLDKRMSVDEELRTAQIALEDADRELRD 882
Q+++L E + + L+L +E+ + +E + + ++EL+ Q L+ + L+
Sbjct: 166 QTDKLCEYKPRELLDLVFDVFGDKEILTRYQEARQHQRATEQELQYTQNNLKALEHSLQT 225
Query: 883 AEKRRSQAEQQSQLIRGQL-----EQQRMEWQALTVRRKTLQDQLLEDGYDLQGVLATLV 937
E+R ++ + QL + Q + R+E+ L + L + + +G+ A L
Sbjct: 226 QEQRVNRYLEWQQLTQEQALLVEEVKPRLEFYQLQEEAERAARSLDANRKEREGLQADLS 285
Query: 938 AEANEKDAEE-ELERIAARIQRLGAINLAAIDEYQQQS-------------ERKRYLDAQ 983
A+ +E D + + E + ++ Q A L D QQ + E+K+ L+AQ
Sbjct: 286 AKTSELDYHKTQAEHLQSQQQ---ATRLHEADLSQQVNQLNKEEGKLEAVLEQKKLLEAQ 342
Query: 984 ---DADLVEALDTL 994
AD+V+A L
Sbjct: 343 AALSADVVQATTEL 356