Pairwise Alignments

Query, 1162 a.a., chromosome segregation protein SMC from Pseudomonas fluorescens FW300-N2E3

Subject, 1175 a.a., Chromosome partition protein Smc from Alteromonas macleodii MIT1002

 Score =  827 bits (2135), Expect = 0.0
 Identities = 496/1204 (41%), Positives = 706/1204 (58%), Gaps = 71/1204 (5%)

Query: 1    VRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60
            +RLK IKLAGFKSFV+PTT+ FP  M A+VGPNGCGKSN+IDAVRWV+GESSAKNLRG++
Sbjct: 1    MRLKKIKLAGFKSFVEPTTIPFPGEMTAIVGPNGCGKSNVIDAVRWVLGESSAKNLRGDA 60

Query: 61   MTDVIFNGSTSRKPVSQASIELVFDNSDGTLIGEYAAYAEISIRRKVTRDSQTTYYLNGT 120
            MTDVIFNGS+SRKPV Q S+ELVFDNS G + GE+A Y E+S++R VTRD+ +TY+LNGT
Sbjct: 61   MTDVIFNGSSSRKPVGQCSVELVFDNSAGRIAGEFANYNELSVKRLVTRDATSTYFLNGT 120

Query: 121  KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIESKPEDLRNFIEEAAGISKYKERRRET 180
            KCRRRD+TD+FLGTGLGPRSY+IIEQGMIS+LIESKP+DLR FIEEAAGISKYKERRRET
Sbjct: 121  KCRRRDVTDLFLGTGLGPRSYAIIEQGMISRLIESKPQDLRVFIEEAAGISKYKERRRET 180

Query: 181  ENRIRRTHENLARLTDLRDELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQEL 240
            ENRIR T +NL RL D+RDEL +QLE+L RQA AA +Y+  +A+ R+LK QL+ALR+ + 
Sbjct: 181  ENRIRHTQDNLERLNDVRDELGKQLEKLQRQAAAATRYKTLRAQARELKGQLAALRFLKN 240

Query: 241  NEQVGQREAIIGNQEISFEALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDI 300
            +E +   +    + ++  + LVA  +  +A +E  +    +  +  + +Q + ++    I
Sbjct: 241  SEHIEALQKQQQSLQLEVDDLVARLQGDEAGLESYKTKQLETKQTIDDLQQQLFTTSNAI 300

Query: 301  ARVEQSIQHGQQRLRQLQDDLKEAERSRLETESHLGHDRTLLATLGEELDMLTPEQEVTS 360
             R+EQ+  H +QR  Q++ +L             +   +  LA   E L+ + PE  +  
Sbjct: 301  TRLEQNALHAKQRKGQVEQELARISEQHELLNHSIDEAQEALAVSNEALENIEPEFALKE 360

Query: 361  AAAEEAAAALEESETTMHGWQEQWDSFNLRSAEPRRQAEVQQSRIQQLETSMERLAERQR 420
            A  E A    E++E  +  +  Q  +      + R+  +   S+IQ   +   R ++R  
Sbjct: 361  AELEHAKERFEDAEQALREFNAQARAQEQTYNQLRQNVQQCHSQIQSTMSMQLRTSQRIS 420

Query: 421  RLAEERDLLSAAPEDAAILDLSEQLAASEATLEDLQ----------ASEEAQVERLEQLR 470
             L +E   L      + I  L EQ +  +  +++ +          + ++ +V  +E  R
Sbjct: 421  ELQDELKQLDEEDFASQITLLEEQCSELDFDIDEAKQLLQESNQKVSQQQGEVNAIEAKR 480

Query: 471  QELQLALQNQQQAQGDLQRL------------------------NGRLAS-LEALQQAAL 505
            +++Q  LQ     +  L+ L                        N  LA  +E++ Q A 
Sbjct: 481  RDVQGQLQTALSTKAALEALQQDASNNEDVLLDGIEKLWQQFSSNQTLAPCVESILQHAK 540

Query: 506  DPGTGAAEWLREQHLAERPRLAEGLKVEAGWELAVETVLGADLQAVLVDDFAGFDLSGFA 565
            DP    +  ++   L  R  L  G+KV           +G+   A+L +       +   
Sbjct: 541  DPVVAKSHDIQAL-LQNRAYLPSGIKVFTDKAFVSTARVGSLAHALLTESSTNESSTQRV 599

Query: 566  QG---DLRLLSPASDGVRIPGSLLDKVEAQIDLSPWLGQVKPVDSLEQALSLRGQLSVGE 622
                 D+ L S   +       L + +E+  +  P                  G      
Sbjct: 600  PAFFNDIYLCSNDDE-------LAEMIESAFNNEP---------------EPEGIAKGFT 637

Query: 623  SLISRDGYWVGRHFLRVRRASEAESGMLARGQEIQRLGLEREEREATVETLETTLQNLRA 682
            S IS  G W    +  V +  EA  G L R  +I+ L    EE E+ ++ +E +L+  + 
Sbjct: 638  SAISPSGLWASSQW--VVKPGEASDGALQRANKIKGLVDSIEETESLIDEIEYSLERAKQ 695

Query: 683  QQRQQENGREHLRRLLQDEARQQGELKAQLSAGKAKAEQLTLRRTRLDEELGELAEQRAL 742
               Q E  ++ ++  L ++  Q+ ++K +LS  + + EQ + R  +L++EL +     A 
Sbjct: 696  ALEQSEAQKQAIQSALGEKENQRAQIKNKLSLLEMQQEQQSTRTAKLNDELAKQELMLAK 755

Query: 743  EHEQIGESRLQLQEALDSMAIDTEQRELLLAQRDSLRERLDRVRQEARQHKD----HAHQ 798
            E EQ+     QL E L+       + E+ +   ++ R+  +R   E R   D      H+
Sbjct: 756  EEEQLA----QLSEKLELQEAQILEHEVHIDDVNAKRDANERTTSELRALVDTLTSQNHE 811

Query: 799  LAVRLGSLKAQHDSTRQALERLELQSERLTEKREQLSLNLEEGEAPLEELRLKLEELLDK 858
            LA++   L+   +   Q + R   Q E   + +E+L   L +  +P E    +L+ LL+ 
Sbjct: 812  LALKKQQLENHQNLYSQQVTRNLQQREEYIKNKERLQKELTQLTSPEEIQEAELQSLLEN 871

Query: 859  RMSVDEELRTAQIALEDADRELRDAEKRRSQAEQQSQLIRGQLEQQRMEWQALTVRRKTL 918
            +  +++     Q +LED ++ LR+AEK      +  Q  +  +++  ++ +   VR  T+
Sbjct: 872  KAELEQLKSAKQSSLEDIEQWLREAEKGHQALGKDIQTRQTNIDKLNIDIEGYRVRANTI 931

Query: 919  QDQLLEDGYDLQGVLATLVAEANEKDAEEELERIAARIQRLGAINLAAIDEYQQQSERKR 978
             +QL E    L+ +L TL  +A EK  +E+LE+  A +QRLGA+NLAA++EY+ QSERK 
Sbjct: 932  LEQLDETQQSLKSILETLPEDAEEKRWQEDLEKTQANLQRLGAVNLAAVEEYETQSERKS 991

Query: 979  YLDAQDADLVEALDTLENVIRKIDKETRNRFKDTFDQINGGLQALFPKVFGGGNAYLELT 1038
            +LD Q  DL EAL+TL++ IRKIDKETR RF  TF+Q+N  L+ LFPKVFGGG+AYL LT
Sbjct: 992  HLDTQHNDLTEALETLQSAIRKIDKETRTRFSTTFEQVNEDLKTLFPKVFGGGSAYLALT 1051

Query: 1039 GEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPL 1098
             +DLL+TGVTIMARPPGKKNSTIHLLSGGEKALTAL+LVFAIF+LNPAPFC+LDEVDAPL
Sbjct: 1052 DDDLLETGVTIMARPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCLLDEVDAPL 1111

Query: 1099 DDANVGRYARLVKEMSQTVQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDVEEAMA 1158
            DDANVGR+  LV EMSQTVQFIYITHNKIAMEMA  L GVTM EPG SR+VAVDV+EA+A
Sbjct: 1112 DDANVGRFCNLVSEMSQTVQFIYITHNKIAMEMASHLTGVTMAEPGVSRMVAVDVDEAVA 1171

Query: 1159 MVDA 1162
              +A
Sbjct: 1172 FAEA 1175