Pairwise Alignments

Query, 302 a.a., Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 315 a.a., cytochrome o ubiquinol oxidase subunit II (NCBI) from Escherichia coli BW25113

 Score =  355 bits (910), Expect = e-102
 Identities = 174/289 (60%), Positives = 223/289 (77%), Gaps = 4/289 (1%)

Query: 5   GTLLLGGCNMTLLDPKGQVGLDERNLIITATLLMLLVVVPVIFMTFAFAWKYRASNKDAV 64
           GT+LL GCN  LLDPKGQ+GL++R+LI+TA  LML+VV+P I M   FAWKYRASNKDA 
Sbjct: 18  GTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK 77

Query: 65  YTPKWSHSTKIEIAVWTIPVLIIIALGYVTYKSTHALDPYKPLESDVKPITIEVVALDWK 124
           Y+P WSHS K+E  VWT+P+LIII L  +T+K+THAL+P KPL  D KPITIEVV++DWK
Sbjct: 78  YSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWK 137

Query: 125 WLFIYPEQGIATVNKIVFPAHTPINFKITSDAVMNSFFIPALGGQIYAMAGMQTKLHLIA 184
           W FIYPEQGIATVN+I FPA+TP+ FK+TS++VMNSFFIP LG QIYAMAGMQT+LHLIA
Sbjct: 138 WFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIA 197

Query: 185 NQNAEMDGISANYSGAGFTGMKFKAIAT-SQEDFDAWVSEVKKAPKQL-EQAEYAALAKQ 242
           N+    DGISA+YSG GF+GMKFKAIAT  +  FD WV++ K++P  + + A +  LA  
Sbjct: 198 NEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAP 257

Query: 243 SQNNPVELYSSVTPNLFQIIVDKYEGMKPGPKVKHEKKEKEVAATQGMD 291
           S+ N VE +S+V P+LF  +++K+  M  G  +   + E E +A +GM+
Sbjct: 258 SEYNQVEYFSNVKPDLFADVINKF--MAHGKSMDMTQPEGEHSAHEGME 304